Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq10 161 7e-35 >seq10 Length=40277251 Score = 161 bits (178), Expect = 7e-35 Identities = 134/164 (82%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||||||||||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 9528512 AGGCCGGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 9528571 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||||||||||| |||||| ||||| || || ||||| || | | Sbjct 9528572 ACGCCCAGGCCCATGTCCCCCGACCGCTGGTACAGCTGGCAGGACAGCTCGCCGTTCCCC 9528631 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||| |||||||||||||| ||||| || Sbjct 9528632 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAG 9528675 Score = 95.1 bits (104), Expect = 9e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 27497 TGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 27556 |||| ||||| || ||||||||||| || || || || || || || | || || |||| Sbjct 9531083 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 9531142 Query 27557 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | |||| ||| ||| ||||||| ||||||| || ||||||||||||||||| | Sbjct 9531143 CTCTGTTGCAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCGTTGGCGTCCCAGATTT 9531202 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 | || ||||| || || || || | |||||| || || Sbjct 9531203 TCACTCCCTTGGAAGACAGGTCCTTAGCGTTTGTAGATCC 9531242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369399934253789