Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq265254 104 5e-18 >seq265254 Length=210 Score = 104 bits (114), Expect = 5e-18 Identities = 138/186 (74%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 14926 AGGATAGCAAGAACAGGAGCTACAACGTACTACCG---GACAAGATAAACACCGCCTACC 14982 |||| ||||||||| | || |||||| || || |||| | |||| |||| Sbjct 30 AGGACAGCAAGAAC-GCAGTTACAACCTAATAAGCAATGACAGCACCTTCACCCAGTACC 88 Query 14983 GCAGCTGGTACCTAGCCTACAACTATGGCGACCCCGAGAAGGGCGTGCGCTCCTGGACGC 15042 ||||||||||||| || |||||||| |||||||| ||| || | ||||| ||||| | Sbjct 89 GCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCGCTCATGGACCC 148 Query 15043 TGCTCACCACCTCGGACGTCACCTGCGGCGTGGAGCAAGTCTACTGGTCGCTGCCCGACA 15102 |||| ||| | ||||| ||||||||| |||||| ||| ||||||| |||| | || Sbjct 149 TGCT-TGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTC--CTGGTCGTTGCCAG-CA 204 Query 15103 TGATGC 15108 |||||| Sbjct 205 TGATGC 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116355582220450