Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq240 190 2e-43 >seq240 Length=2402814 Score = 190 bits (210), Expect = 2e-43 Identities = 384/570 (67%), Gaps = 0/570 (0%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || || ||||| |||||||||| |||||||| |||||||| || ||||| ||||| Sbjct 1019888 GGAGATCTAGGCCCGGTTTACGGCTTTCAGTGGAGGCATTTTGGGGCCGAATACAAAGAT 1019947 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 | ||| | |||| | ||||| | || |||||||| | || | || ||||| Sbjct 1019948 ATGGATTCAGATTATTCAGGCGAAGGAGTAGACCAGCTGCAGAAGGTGACTGACACAATC 1020007 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 ||||| ||||| | | || | || || | | ||||||||||| ||| || | Sbjct 1020008 AAAACCAACCCTAATGACAGAATCGTCATCATGTGTGCCTGGAATCCAAAAGATCTCGCG 1020067 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 | | || || || || || | | | || ||||| ||||| | |||||||| | Sbjct 1020068 CTCACGGCCCTCCCACCCTGCCCTGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGCTG 1020127 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 |||||||| | ||| || | ||||| || |||||||| || | || |||||||| || Sbjct 1020128 TCCTGCCAGCTGTACGAGTGGTCGGGAGACATGGGCCTGGGCATGCCCTTCAACATCGCC 1020187 Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTA 19148 | || | || || |||||||| | || || | ||||| || || | || || || Sbjct 1020188 AGCTACTCCCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACTTT 1020247 Query 19149 ATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAG 19208 | || || |||| ||||| || |||||| ||||||| || || | | ||| ||||| Sbjct 1020248 GTACACACTTTGGGAGATGCCCACATTTACATGAATCACATTGAGCCGCTGAAAATGCAG 1020307 Query 19209 CTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGATATA 19268 || ||| |||| ||||| | || ||||| ||| ||| || | || Sbjct 1020308 CTTCAGCGAGAACCAAGGCCTTTCCTGAAGCTCAAAATCCTTCAAAAAGTTGAGAAAATT 1020367 Query 19269 AACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAA 19328 | ||||| || || || |||||| |||| || || ||||| || || | | ||| Sbjct 1020368 GATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTAAA 1020427 Query 19329 ATGGAAATGGCTCTTTAATGGATTTTTAAA 19358 |||||||||||| || || | ||||||| Sbjct 1020428 ATGGAAATGGCTATTAAAAGTGCTTTTAAA 1020457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398156638427625