Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_001405.1 Length=35937 Score E Sequences producing significant alignments: (Bits) Value seq265254 336 5e-88 >seq265254 Length=210 Score = 336 bits (372), Expect = 5e-88 Identities = 208/216 (96%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 15271 AGAAGAAACCGGTGATCAAACCCCTGACAGAGGACAGCAAGAAACGCAGTTACAACCTAA 15330 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 AGAAGAA-CCGGTGATCAAACCCCTGACAGAGGACAGCAAGAA-CGCAGTTACAACCTAA 58 Query 15331 TAAGCAATGACAGCACCTTCACCCAGTACCGCAGCTGGTACCTTGCATACAACTACGGCG 15390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 TAAGCAATGACAGCACCTTCACCCAGTACCGCAGCTGGTACCTTGCATACAACTACGGCG 118 Query 15391 ACCCTCAGACCGGGATCCGCTCATGGACCCTCCTTTGCACTCCTGACGTAACCTGCGGCT 15450 ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 119 ACCCTCAGACCGGAATCCGCTCATGGACCCTGC-TTGCACTCCTGACGTAACCTGCGGCT 177 Query 15451 CGGAGCAGGTCTACTGGTCGTTGCCAGACATGATGC 15486 ||||||||||| |||||||||||||| |||||||| Sbjct 178 CGGAGCAGGTC--CTGGTCGTTGCCAG-CATGATGC 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114499302270550