Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq24 307 1e-78 seq240 279 6e-70 seq49 205 1e-47 seq214 168 8e-37 seq285 123 3e-23 seq132 100 3e-16 seq2234 95.1 1e-14 >seq24 Length=14023012 Score = 307 bits (340), Expect = 1e-78 Identities = 589/858 (69%), Gaps = 10/858 (1%) Strand=Plus/Plus Query 9500 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 9559 |||| || ||||||| | | ||| |||| || ||| || ||||| || | || | | Sbjct 12578051 TTGGCCTGCTGGGCAACGTGGTGGTGCTGATGATCCTCACAAAATACAAGAGGCTCCACA 12578110 Query 9560 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 9619 | | || ||||| | ||| | ||| |||| | |||||| |||| | || | || Sbjct 12578111 TCATGACCAACATCTACCTGCTCAACCTGGCCGTTTCTGACCTGCTTGTCCTGCTCACGC 12578170 Query 9620 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 9679 |||| || ||||| ||||| ||||| || | | || ||| ||||||| | | ||| Sbjct 12578171 TGCCGTTCTGGATTCACTACATTGGG-TGGA--AAGAGTGGGCTTTTGGCCGCTGCATGT 12578227 Query 9680 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 9739 |||| |||||| || | | | ||||| ||||||| || |||| | |||||||| Sbjct 12578228 GTAAGCTGCTCTCTGGGCTTTATCACATGGGCTTGTACAGTGAGATCTTCTTCATCATCC 12578287 Query 9740 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 9799 |||| || ||||| ||||||| || | ||| | ||||| ||| || | | | Sbjct 12578288 TGCTCACCATAGACCGGTATCTGGCCATCGTCCACGCTGTGTTTGCCCTGCGAGCCCGGA 12578347 Query 9800 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCC 9859 | || || | ||| || | ||| ||| | | |||| ||||||||| || || Sbjct 12578348 CGGTCACTTTTGGTATCATCACCAGTGCCTTCATCTGGGGACTGGCAGGGCTGGCAGCCA 12578407 Query 9860 TCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTT 9919 ||||||| ||| |||| |||| || || || ||| | | | ||| ||||| Sbjct 12578408 TCCCTGACTTTATCTTCCATGAGTCTCAGGAGGAGTTTGGCAAGTCTGTCTGTAATCCTC 12578467 Query 9920 ACTACCCAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATG 9978 ||||| || || | || ||| |||| | ||| | | | | ||| ||| Sbjct 12578468 TTTACCCTCAGG-GTAGAGAAGATGCCTGGAAGATTTTCCAAGCTCTGAGGATGAATATC 12578526 Query 9979 TTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGA 10038 || ||||| | |||||||||| |||||||||||||||||| | ||| || | || Sbjct 12578527 TTGGGTCTCGCTCTGCCTCTGCTTGTTATGGCTGTCTGCTACTCAGGAATCATTAAAACG 12578586 Query 10039 CTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATG 10098 ||| |||| | ||||| || || || || ||||||||| ||||||| |||||||||||| Sbjct 12578587 CTGCTGAGATGTCCCAGTAAAAAAAAATATAAGGCCATCCGGCTCATTTTTGTCATCATG 12578646 Query 10099 GTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC 10158 |||| || || |||| ||||||||||||||| | |||||||| || ||| | ||||| Sbjct 12578647 GTGGTCTTCTTCATTTTCTGGACACCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAA 12578706 Query 10159 GCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATA 10218 | ||| ||| | ||| ||| |||||| | |||| |||| ||||| | Sbjct 12578707 ATGA-ACTTTGAGACCGACTGTGAGCA--GAGCAGACAGCTGGATCTGGCCATGCTGGTG 12578763 Query 10219 ACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGG 10278 || | | ||| || | ||||| ||| ||||||| ||||| ||||| ||||| || Sbjct 12578764 ACGGAGGTGATTGCCCACTCGCACTGCTGCGTCAACCCTGTGATTTACGCCTTCGTCGGT 12578823 Query 10279 GAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 10337 |||| ||| ||||| ||||| |||||| ||||||| |||||||||||||| | | Sbjct 12578824 GAGAGGTTCCAGAAG-CACCTCCGCCACTTTTTCCACAAGCACGTGGCCATCTACTTGGG 12578882 Query 10338 CAAGTACATCCCCTTCCT 10355 ||| |||||||| ||||| Sbjct 12578883 CAAATACATCCCATTCCT 12578900 Score = 307 bits (340), Expect = 1e-78 Identities = 589/858 (69%), Gaps = 10/858 (1%) Strand=Plus/Plus Query 176386 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 176445 |||| || ||||||| | | ||| |||| || ||| || ||||| || | || | | Sbjct 12578051 TTGGCCTGCTGGGCAACGTGGTGGTGCTGATGATCCTCACAAAATACAAGAGGCTCCACA 12578110 Query 176446 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 176505 | | || ||||| | ||| | ||| |||| | |||||| |||| | || | || Sbjct 12578111 TCATGACCAACATCTACCTGCTCAACCTGGCCGTTTCTGACCTGCTTGTCCTGCTCACGC 12578170 Query 176506 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 176565 |||| || ||||| ||||| ||||| || | | || ||| ||||||| | | ||| Sbjct 12578171 TGCCGTTCTGGATTCACTACATTGGG-TGGA--AAGAGTGGGCTTTTGGCCGCTGCATGT 12578227 Query 176566 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 176625 |||| |||||| || | | | ||||| ||||||| || |||| | |||||||| Sbjct 12578228 GTAAGCTGCTCTCTGGGCTTTATCACATGGGCTTGTACAGTGAGATCTTCTTCATCATCC 12578287 Query 176626 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 176685 |||| || ||||| ||||||| || | ||| | ||||| ||| || | | | Sbjct 12578288 TGCTCACCATAGACCGGTATCTGGCCATCGTCCACGCTGTGTTTGCCCTGCGAGCCCGGA 12578347 Query 176686 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCC 176745 | || || | ||| || | ||| ||| | | |||| ||||||||| || || Sbjct 12578348 CGGTCACTTTTGGTATCATCACCAGTGCCTTCATCTGGGGACTGGCAGGGCTGGCAGCCA 12578407 Query 176746 TCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTT 176805 ||||||| ||| |||| |||| || || || ||| | | | ||| ||||| Sbjct 12578408 TCCCTGACTTTATCTTCCATGAGTCTCAGGAGGAGTTTGGCAAGTCTGTCTGTAATCCTC 12578467 Query 176806 ACTACCCAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATG 176864 ||||| || || | || ||| |||| | ||| | | | | ||| ||| Sbjct 12578468 TTTACCCTCAGG-GTAGAGAAGATGCCTGGAAGATTTTCCAAGCTCTGAGGATGAATATC 12578526 Query 176865 TTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGA 176924 || ||||| | |||||||||| |||||||||||||||||| | ||| || | || Sbjct 12578527 TTGGGTCTCGCTCTGCCTCTGCTTGTTATGGCTGTCTGCTACTCAGGAATCATTAAAACG 12578586 Query 176925 CTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATG 176984 ||| |||| | ||||| || || || || ||||||||| ||||||| |||||||||||| Sbjct 12578587 CTGCTGAGATGTCCCAGTAAAAAAAAATATAAGGCCATCCGGCTCATTTTTGTCATCATG 12578646 Query 176985 GTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC 177044 |||| || || |||| ||||||||||||||| | |||||||| || ||| | ||||| Sbjct 12578647 GTGGTCTTCTTCATTTTCTGGACACCCTACAACCTGGTTCTCCTTCTCTCTGCTTTTCAA 12578706 Query 177045 GCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATA 177104 | ||| ||| | ||| ||| |||||| | |||| |||| ||||| | Sbjct 12578707 ATGA-ACTTTGAGACCGACTGTGAGCA--GAGCAGACAGCTGGATCTGGCCATGCTGGTG 12578763 Query 177105 ACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGG 177164 || | | ||| || | ||||| ||| ||||||| ||||| ||||| ||||| || Sbjct 12578764 ACGGAGGTGATTGCCCACTCGCACTGCTGCGTCAACCCTGTGATTTACGCCTTCGTCGGT 12578823 Query 177165 GAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 177223 |||| ||| ||||| ||||| |||||| ||||||| |||||||||||||| | | Sbjct 12578824 GAGAGGTTCCAGAAG-CACCTCCGCCACTTTTTCCACAAGCACGTGGCCATCTACTTGGG 12578882 Query 177224 CAAGTACATCCCCTTCCT 177241 ||| |||||||| ||||| Sbjct 12578883 CAAATACATCCCATTCCT 12578900 Score = 123 bits (136), Expect = 3e-23 Identities = 220/317 (69%), Gaps = 13/317 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | |||| ||||||||| | ||| | | || ||| | || | | Sbjct 12664205 TGCCACTGCTTGTCATGGTCATCTGCTACTCAGGAATCCTTAAAACCCTGCTTCGGTGTC 12664264 Query 10052 CCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | |||||||| |||||||||| ||||||||||||| ||||||| | ||| | Sbjct 12664265 GCAACGAGAAGAAGAGGCACAAGGCCATGAGGCTCATCTTTGCCATCATGATCATCTACT 12664324 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 10167 || | |||||| | ||||||||||| || ||||| ||| |||||||| | | || || Sbjct 12664325 TTCTCTTTTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTTCAGGAATCCTTTG 12664384 Query 10168 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223 || | | |||||||| || | | || ||||| ||| ||| | | ||| | Sbjct 12664385 GCCTGAATAACTGCAGTG-GCTCT----AATAGACTGGACCAAGCTGTGCAGGTGACAGA 12664439 Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283 || | | || ||||| ||||||||||| | ||||| || ||||| |||||||| Sbjct 12664440 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAA 12664499 Query 10284 GTTTAGAAGACACCTGT 10300 ||| || | |||||| Sbjct 12664500 GTTCAGGAAGTACCTGT 12664516 Score = 123 bits (136), Expect = 3e-23 Identities = 220/317 (69%), Gaps = 13/317 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | |||| ||||||||| | ||| | | || ||| | || | | Sbjct 12664205 TGCCACTGCTTGTCATGGTCATCTGCTACTCAGGAATCCTTAAAACCCTGCTTCGGTGTC 12664264 Query 176938 CCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | |||||||| |||||||||| ||||||||||||| ||||||| | ||| | Sbjct 12664265 GCAACGAGAAGAAGAGGCACAAGGCCATGAGGCTCATCTTTGCCATCATGATCATCTACT 12664324 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 177053 || | |||||| | ||||||||||| || ||||| ||| |||||||| | | || || Sbjct 12664325 TTCTCTTTTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTTCAGGAATCCTTTG 12664384 Query 177054 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109 || | | |||||||| || | | || ||||| ||| ||| | | ||| | Sbjct 12664385 GCCTGAATAACTGCAGTG-GCTCT----AATAGACTGGACCAAGCTGTGCAGGTGACAGA 12664439 Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169 || | | || ||||| ||||||||||| | ||||| || ||||| |||||||| Sbjct 12664440 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAA 12664499 Query 177170 GTTTAGAAGACACCTGT 177186 ||| || | |||||| Sbjct 12664500 GTTCAGGAAGTACCTGT 12664516 Score = 100 bits (110), Expect = 3e-16 Identities = 196/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 ||||||||| |||||||| | ||||| ||||| || |||||| | | ||| ||| | || Sbjct 12652466 AAGAAGAAGCACAAGGCCGTGAGGCTTATCTTCGTGATCATGATCGTCTACTTTCTCTTC 12652525 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 10176 ||| | ||||||||||| || ||||| ||| ||||| || | || || || |||| Sbjct 12652526 TGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCA-GGAATTCT--TTGGCCTG 12652582 Query 10177 ---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCC 10233 | ||| | |||| | | ||| || ||| | | || | || | | Sbjct 12652583 AGTAACTGTAAGAACATCAGTCAGCTAGACCAAGCCATGCAGGTGACTGAGACCCTGGGG 12652642 Query 10234 TACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGA 10293 || ||||| ||||||||||| | |||||||| ||||| ||||||||||| |||||| Sbjct 12652643 CTGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGAGAAGTTCAGAAGA 12652702 Query 10294 CACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 | || | | || |||| | || | |||| |||||||||| Sbjct 12652703 TATCTCTCCGTGTTTTTCCGAAAGCACATTGCCAAACACCTCTGCAA 12652749 Score = 100 bits (110), Expect = 3e-16 Identities = 196/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 ||||||||| |||||||| | ||||| ||||| || |||||| | | ||| ||| | || Sbjct 12652466 AAGAAGAAGCACAAGGCCGTGAGGCTTATCTTCGTGATCATGATCGTCTACTTTCTCTTC 12652525 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 177062 ||| | ||||||||||| || ||||| ||| ||||| || | || || || |||| Sbjct 12652526 TGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCA-GGAATTCT--TTGGCCTG 12652582 Query 177063 ---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCC 177119 | ||| | |||| | | ||| || ||| | | || | || | | Sbjct 12652583 AGTAACTGTAAGAACATCAGTCAGCTAGACCAAGCCATGCAGGTGACTGAGACCCTGGGG 12652642 Query 177120 TACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGA 177179 || ||||| ||||||||||| | |||||||| ||||| ||||||||||| |||||| Sbjct 12652643 CTGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGAGAAGTTCAGAAGA 12652702 Query 177180 CACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 | || | | || |||| | || | |||| |||||||||| Sbjct 12652703 TATCTCTCCGTGTTTTTCCGAAAGCACATTGCCAAACACCTCTGCAA 12652749 >seq240 Length=2402814 Score = 279 bits (308), Expect = 6e-70 Identities = 538/782 (69%), Gaps = 15/782 (2%) Strand=Plus/Minus Query 145543 GCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCC 145602 ||||| ||||| || | || || || | |||||| || | | |||||| || ||| Sbjct 1020438 GCCATTTCCATTTTAATAGTCGGATGAGGATTGTAGCCTTCAATCTGAAAGTCTTCAGCC 1020379 Query 145603 CTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTG-GGAAAGGGCCGGGG 145661 |||||||||| || | ||| || ||||| ||||| | ||||||| | || Sbjct 1020378 TTGAAGTCATCAATTTTCTCAACTTTTTGAAGGATTTTGAGCTTCAGGAAAGGCCTTGGT 1020319 Query 145662 GCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCC 145720 ||| ||| ||||| | ||||| ||||| | ||| || | ||| | ||| || || | Sbjct 1020318 TCTCGCTGA--AGCTGCATTTTCAGCGGCTCAATGTGATTCATGTAAATGTGGGCATCTC 1020261 Query 145721 CCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780 ||| ||| | ||||| || |||| ||||| |||| ||| || | ||||||||| | Sbjct 1020260 CCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGTAGGTGA 1020201 Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840 |||||||||||||||| ||||||||||||| ||||| |||||||| ||||| | || || Sbjct 1020200 GCAGGGAGTAGCTGGCGATGTTGAAGGGCATGCCCAGGCCCATGTCTCCCGACCACTCGT 1020141 Query 145841 ACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCG 145900 ||||||||||||| ||||| ||| | |||||||||||||||| ||| ||||||| | Sbjct 1020140 ACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCAGGGCAGGGTG 1020081 Query 145901 GCAGGGCCATG-GCGGGCAGGTCCGCCGGGTTCCAGGC---GGTGAGGACGAGCCTCCTG 145956 | |||||| || ||| | || || || |||||||| ||| ||||| | ||| Sbjct 1020080 GGAGGGCCGTGAGCGCG-AGATCTTTTGGATTCCAGGCACACATGATGACGA---TTCTG 1020025 Query 145957 CTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCC 146016 | ||||| | ||||| | ||| | | |||||||| || || | || Sbjct 1020024 TCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGCTGGTCTACTCCTTCGCCT 1019965 Query 146017 CGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAG 146076 ||||||| | || ||| ||||||| || ||||||||||| || ||||| Sbjct 1019964 GAATAATCTGAATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCGTAA 1019905 Query 146077 ACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || || || || || ||| | ||| | ||| | | | | | |||||| ||| Sbjct 1019904 ACCGGGCCTAGATCTCC-TGCT-CTGGTGGAGAATCCCAG-GCTGTCCAAGAAGTCTCGG 1019848 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 ||||| ||||||||||||| || || ||| | | || ||||| || | || ||||| Sbjct 1019847 GACCCACTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGAT 1019788 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 ||| |||| ||||| |||| | || | || | |||||| || | ||||| || Sbjct 1019787 CCCTTGATAAACCACAGCAATCCCTCCAAAACATCTTCCCAGAAAACACGTTTGGTTGTG 1019728 Query 146257 AGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTG 146316 ||||| || || | | | |||| ||| ||||| | ||| || ||||||||| Sbjct 1019727 AGCAGTGGAAATTCATCTCTCAGGCTGTAGCGCGCCTGCATGCTGAACACCGACAGGGTG 1019668 Query 146317 CC 146318 || Sbjct 1019667 CC 1019666 >seq49 Length=11369404 Score = 205 bits (226), Expect = 1e-47 Identities = 147/168 (88%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| |||||||| |||||||| |||||||||||| Sbjct 7921594 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAATAGCTGGCGATGTTGAAGGGC 7921535 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| |||||||||||||||||||| ||||| ||| | || Sbjct 7921534 ACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 7921475 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGGG 145916 |||||||||||||| ||| |||||||||||| ||||||||| ||||| Sbjct 7921474 ACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGGAGGGCCATGAGCGGG 7921427 >seq214 Length=2790627 Score = 168 bits (186), Expect = 8e-37 Identities = 132/157 (84%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||| | |||||||| |||||||| || ||||| ||||||||||||||||| | ||| Sbjct 472853 CAGCGACGCAGCCTCAGTCTGAGGGTCTTCAGCTTCTCCCCCAGGGAGTTCACATGCTCC 472794 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | || ||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 472793 TTGAT---GTCAGGGCCGTGGTTCTCCGCCTGCGGCATCACCTCCTCCAGGTAAAACTGG 472737 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 472736 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 472700 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||| |||||||| | ||||||||||| ||||||||||| || |||||||| ||||| Sbjct 475117 TCAGTTCTTCATCTTCATTGTCATGTAGGCTTCTATGTAGTTGATAAAGATGTCGAACTC 475058 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| ||||||||||| || || ||||||| Sbjct 475057 ACTCATGGCTTTGTAGACCCCCTTCTCTTGGAGCT 475023 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/173 (73%), Gaps = 10/173 (6%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| ||||||| |||||||| | |||||| ||||||||||||||||||| Sbjct 471566 AAAGAAAGTCTTCACCCTGCCAAAGGCGGCTCGGAGCTCCCGGAGCATGTGGGGCAGGCT 471507 Query 138357 GG-TGGGCAATGTAGGGCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTC----GGCC 138411 || |||| | || | |||| || | |||||| || | ||| | || ||| Sbjct 471506 GGCTGGGAAGTG-GGCGCAGCTGTTCTCAGACTGGGTGCC----TTGGTCTCGGCTGGCT 471452 Query 138412 CACACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464 ||| ||||||||||| | |||||| || ||||| | || | | |||||| Sbjct 471451 GCCACTCCGGCCAGGAGGATCAGGCAGCAGAGCAGTGCTGAGCGGGGCATGGC 471399 >seq285 Length=1675874 Score = 123 bits (136), Expect = 3e-23 Identities = 253/373 (68%), Gaps = 25/373 (7%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGC-GCAAAGTCCTC 145598 || ||||| |||||| || | || || || | |||||| || | | | |||||| || Sbjct 1652203 ACAGCCATTTCCATGTTAATAGTCGGATGAGGATTGTAGCCTTCAACCTGAAAAGTCTTC 1652144 Query 145599 CGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGG-GAAAGGGCC 145657 ||| |||||||||| || | ||| | | |||||| ||||| | | |||| ||| Sbjct 1652143 AGCCTTGAAGTCATCAATTTTCTCAGCTTTTCAAAGGATCTTGAGCTTTGAGAAAAGGCT 1652084 Query 145658 GGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCG 145716 || || ||| ||||| | ||||| |||| ||| || ||||| | || || Sbjct 1652083 TGGTTCTTGCTGA--AGCTGCAT-TTCAGCAGCTCAGTGTGATTCAGGTAAATGTATGCA 1652027 Query 145717 TCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAG 145776 || || | ||| | ||||| ||| |||| ||| | || ||||||| Sbjct 1652026 TCTCCTAAAGTGTGTACAAAGTC------------GCCTGTGATGTGTGTGATCATGTAG 1651979 Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || ||||||| ||||| || |||||||||||||| ||||| ||| ||| || || Sbjct 1651978 GTGAGCAGGGTGTAGCGGGTGATGTTGAAGGGCACACCCAGGCCCCTGTGTCCTGACAAG 1651919 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 ||||||||| ||||||| ||||| || || ||||||||||| ||| |||| Sbjct 1651918 TGGTACAGCCGGCAGGACAGCTCACCTCC-------TAGAACTGGCAAAGGGCATGGCGT 1651866 Query 145897 GGCGGCAGGGCCA 145909 || || ||||||| Sbjct 1651865 GGGGGGAGGGCCA 1651853 >seq132 Length=5038585 Score = 100 bits (110), Expect = 3e-16 Identities = 320/490 (65%), Gaps = 31/490 (6%) Strand=Plus/Plus Query 9620 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 9679 ||||||| ||||| |||||||||| | || | |||| | | ||||| | | ||| Sbjct 1573035 TGCCATTCTGGATTCACTATATTG-AGTGGA--ATGAGTCGGGGTTTGGCCACTGCTTGT 1573091 Query 9680 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 9739 | || ||||| || | | | |||| |||||||| || |||| | |||||||| Sbjct 1573092 GCAAGTTGCTCTCTGGGCTTTATCGCATGGGCTTGTACAGCGAGATCTTCTTCATCATCC 1573151 Query 9740 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAG 9797 |||| || ||||| ||||||| || ||||| | | || ||| |||| | Sbjct 1573152 TGCTGACCATAGACTGGTATCTGGCCATTGTCCACACCGTGTTTGCCCTTTGTGCCCCG- 1573210 Query 9798 AACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTC 9857 ||||| || | ||| || || ||| || | |||||| |||||||| | | Sbjct 1573211 -ACAGTCACTTTTGGTATCGTCACCAATGCCTTCACCTGGGGCTTGGCAGGGCTAGCCAC 1573269 Query 9858 CCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT-CAGTGTGATC 9916 ||||||||||||| |||| |||| || | ||||| | |||| || Sbjct 1573270 CCTCCCTGAATTTATCTTCCATGAGTCCCTCG---------GTAGGTCTGCAGTCC--TC 1573318 Query 9917 CTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTA 9976 ||||| | | |||| | | ||| |||| || | | | | | || || Sbjct 1573319 TTTACT--CAAAGGATGGGGA-AGATGCCTGGAATCGTTTCTAATCTCTGAGGATGTATA 1573375 Query 9977 TGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAA 10036 | || |||||| | ||||||||||||||||||||||||||| || | ||| || | || Sbjct 1573376 TCTTTGGTCTCACTCTGCCTCTGCTCATTATGGCTGTCTGCTGCTCAGGAATCATTAAAA 1573435 Query 10037 GACTGTTGAGGCGCCCCAG---------CAAGAAGAAGTACAAGGCCATCAGGCTCATCT 10087 |||| |||| ||||||| || || || ||||||| ||| ||||||| | Sbjct 1573436 CACTGCTGAGAAGCCCCAGTTTAAAAAAAAAAAACAAAAACAAGGCTATCTGGCTCATTT 1573495 Query 10088 TTGTCATCAT 10097 |||||||||| Sbjct 1573496 TTGTCATCAT 1573505 Score = 100 bits (110), Expect = 3e-16 Identities = 320/490 (65%), Gaps = 31/490 (6%) Strand=Plus/Plus Query 176506 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 176565 ||||||| ||||| |||||||||| | || | |||| | | ||||| | | ||| Sbjct 1573035 TGCCATTCTGGATTCACTATATTG-AGTGGA--ATGAGTCGGGGTTTGGCCACTGCTTGT 1573091 Query 176566 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 176625 | || ||||| || | | | |||| |||||||| || |||| | |||||||| Sbjct 1573092 GCAAGTTGCTCTCTGGGCTTTATCGCATGGGCTTGTACAGCGAGATCTTCTTCATCATCC 1573151 Query 176626 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAG 176683 |||| || ||||| ||||||| || ||||| | | || ||| |||| | Sbjct 1573152 TGCTGACCATAGACTGGTATCTGGCCATTGTCCACACCGTGTTTGCCCTTTGTGCCCCG- 1573210 Query 176684 AACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTC 176743 ||||| || | ||| || || ||| || | |||||| |||||||| | | Sbjct 1573211 -ACAGTCACTTTTGGTATCGTCACCAATGCCTTCACCTGGGGCTTGGCAGGGCTAGCCAC 1573269 Query 176744 CCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTT-CAGTGTGATC 176802 ||||||||||||| |||| |||| || | ||||| | |||| || Sbjct 1573270 CCTCCCTGAATTTATCTTCCATGAGTCCCTCG---------GTAGGTCTGCAGTCC--TC 1573318 Query 176803 CTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTA 176862 ||||| | | |||| | | ||| |||| || | | | | | || || Sbjct 1573319 TTTACT--CAAAGGATGGGGA-AGATGCCTGGAATCGTTTCTAATCTCTGAGGATGTATA 1573375 Query 176863 TGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAA 176922 | || |||||| | ||||||||||||||||||||||||||| || | ||| || | || Sbjct 1573376 TCTTTGGTCTCACTCTGCCTCTGCTCATTATGGCTGTCTGCTGCTCAGGAATCATTAAAA 1573435 Query 176923 GACTGTTGAGGCGCCCCAG---------CAAGAAGAAGTACAAGGCCATCAGGCTCATCT 176973 |||| |||| ||||||| || || || ||||||| ||| ||||||| | Sbjct 1573436 CACTGCTGAGAAGCCCCAGTTTAAAAAAAAAAAACAAAAACAAGGCTATCTGGCTCATTT 1573495 Query 176974 TTGTCATCAT 176983 |||||||||| Sbjct 1573496 TTGTCATCAT 1573505 >seq2234 Length=6440 Score = 95.1 bits (104), Expect = 1e-14 Identities = 235/356 (66%), Gaps = 3/356 (1%) Strand=Plus/Minus Query 176346 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 176405 || ||| || | ||| || |||| || || ||| || |||| || | ||||| ||| Sbjct 2160 GCCCAGCTGCTGCCCCCCTTGTACTCCCTGGTATTTGTCGTTGGCCTGATTGGCAACATC 2101 Query 176406 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 176465 ||||||| | || |||| ||||| || | ||| || | | || | ||| | || Sbjct 2100 CTAGTGGTCCTAGTTCTCATGCAATACAAGAGGCTCAGAAGCATGACCAGCATCTACCTC 2041 Query 176466 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 176525 | ||| |||| || |||||| || | || || || || |||| || ||||| |||| Sbjct 2040 CTCAACCTGGCCATTTCTGACCTGATCTTCCTCTTCACACTGCCCTTCTGGATTGACTAC 1981 Query 176526 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 176585 | || | |||| ||| |||||| | | ||||||| ||||| || | Sbjct 1980 AAGC---TGAAGGATGACTGGGTTTTTGGGGATCACATGTGTAAGTTGCTCTCTGGGCTC 1924 Query 176586 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 176645 | || ||| ||||||| || |||| | |||||||||||| || | |||||||| Sbjct 1923 TATTTCATCGGCTTGTACAGTGAGATCTTCTTCATCATCCTGCTCACCATCGACAGGTAC 1864 Query 176646 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 176701 || || ||||| |||| || ||| || || | | || || |||| ||| || Sbjct 1863 CTGGCCATTGTCCATGCAGTCTTTGCCCTGCGGGCTCGGACCGTCACCTTTGGTAT 1808 Score = 95.1 bits (104), Expect = 1e-14 Identities = 235/356 (66%), Gaps = 3/356 (1%) Strand=Plus/Minus Query 9460 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 9519 || ||| || | ||| || |||| || || ||| || |||| || | ||||| ||| Sbjct 2160 GCCCAGCTGCTGCCCCCCTTGTACTCCCTGGTATTTGTCGTTGGCCTGATTGGCAACATC 2101 Query 9520 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 9579 ||||||| | || |||| ||||| || | ||| || | | || | ||| | || Sbjct 2100 CTAGTGGTCCTAGTTCTCATGCAATACAAGAGGCTCAGAAGCATGACCAGCATCTACCTC 2041 Query 9580 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 9639 | ||| |||| || |||||| || | || || || || |||| || ||||| |||| Sbjct 2040 CTCAACCTGGCCATTTCTGACCTGATCTTCCTCTTCACACTGCCCTTCTGGATTGACTAC 1981 Query 9640 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 9699 | || | |||| ||| |||||| | | ||||||| ||||| || | Sbjct 1980 AAGC---TGAAGGATGACTGGGTTTTTGGGGATCACATGTGTAAGTTGCTCTCTGGGCTC 1924 Query 9700 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 9759 | || ||| ||||||| || |||| | |||||||||||| || | |||||||| Sbjct 1923 TATTTCATCGGCTTGTACAGTGAGATCTTCTTCATCATCCTGCTCACCATCGACAGGTAC 1864 Query 9760 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 9815 || || ||||| |||| || ||| || || | | || || |||| ||| || Sbjct 1863 CTGGCCATTGTCCATGCAGTCTTTGCCCTGCGGGCTCGGACCGTCACCTTTGGTAT 1808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588035687469000