Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq240 187 2e-42 >seq240 Length=2402814 Score = 187 bits (206), Expect = 2e-42 Identities = 499/762 (65%), Gaps = 3/762 (0%) Strand=Plus/Plus Query 20014 ATGCAATCTCGATATAACTTGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTT 20073 ||||| | || || | | ||||| |||||||||| | | || || ||||| || || Sbjct 1019687 ATGCAGGCGCGCTACAGCCTGAGAGATGAATTTCCACTGCTCACAACCAAACGTGTTTTC 1019746 Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133 ||| ||| ||| | || | || | |||||||| || ||||| ||||| ||| ||| Sbjct 1019747 TGGGAAGATGTTTTGGAGGGATTGCTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAG 1019806 Query 20134 CTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGC 20193 || || ||||| || || ||| ||| ||| || | || || ||||| Sbjct 1019807 CTGTCTTCCAAGGGAGTGAAAATCTGGGACGCCAGTGGGTCCCGAGACTTCTTGGACAGC 1019866 Query 20194 AATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGA 20253 ||||| || | | || || ||| | || || || || || ||||| ||||| Sbjct 1019867 CTGGGATTCTCCACCAG---AGCAGGAGATCTAGGCCCGGTTTACGGCTTTCAGTGGAGG 1019923 Query 20254 CATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAA 20313 |||||||| || ||||| || ||| | || |||||| || |||||||||| || Sbjct 1019924 CATTTTGGGGCCGAATACAAAGATATGGATTCAGATTATTCAGGCGAAGGAGTAGACCAG 1019983 Query 20314 TTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGC 20373 | || || || | | | ||| ||||| ||||| || ||||||| | || | || Sbjct 1019984 CTGCAGAAGGTGACTGACACAATCAAAACCAACCCTAATGACAGAATCGTCATCATGTGT 1020043 Query 20374 GCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAA 20433 |||||||| | |||||| | | | | ||| | || || || | | || ||||| Sbjct 1020044 GCCTGGAATCCAAAAGATCTCGCGCTCACGGCCCTCCCACCCTGCCCTGCCCTTTGCCAG 1020103 Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 || ||||| | || ||| |||| || || |||| | | || | || ||||| Sbjct 1020104 TTCTACGTGGTGAACGGTGAGCTGTCCTGCCAGCTGTACGAGTGGTCGGGAGACATGGGC 1020163 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 ||||| | || ||||| || || || || | ||||| || || ||||||||||| | Sbjct 1020164 CTGGGCATGCCCTTCAACATCGCCAGCTACTCCCTGCTCACCTACATGATTGCACACATC 1020223 Query 20554 ACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 |||| | || | |||||||| || ||||| | ||||| || || |||||| | ||| Sbjct 1020224 ACAGGCCTGAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCCCACATTTACATGAAT 1020283 Query 20614 CATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGC 20673 || || || || | ||| | ||| | ||| |||||| | |||| | || Sbjct 1020284 CACATTGAGCCGCTGAAAATGCAGCTTCAGCGAGAACCAAGGCCTTTCCTGAAGCTCAAA 1020343 Query 20674 ATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGT 20733 || || || ||| | | ||| | || || || ||||| || ||| | | ||||| Sbjct 1020344 ATCCTTCAAAAAGTTGAGAAAATTGATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGC 1020403 Query 20734 TATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAA 20775 || ||||| ||| | ||| |||||||||| || || || Sbjct 1020404 TACAATCCTCATCCGACTATTAAAATGGAAATGGCTATTAAA 1020445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397837717655125