Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 1e-12 >seq4 Length=22931326 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| ||||| ||||||||||||||| |||| | || ||||| || |||| Sbjct 4287658 TTGTAGCCTTTGCGGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATCTTCT 4287717 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | |||| || ||||| | |||||||| | ||| || | Sbjct 4287718 GGCTCAAGAAGCGAGGACTGATGCCGGGCCTCACATTTTCCAATGAACTTATTAGCAGAG 4287777 Query 102036 ACGA 102039 |||| Sbjct 4287778 ACGA 4287781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986075391272375