Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq103000 102 5e-17 >seq103000 Length=415 Score = 102 bits (112), Expect = 5e-17 Identities = 144/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || || ||||| || |||||||||||||| | | || || || ||||| |||||||| Sbjct 207 GTTGATTCTTTCTGGATATTGTAATCAGAAAGAGTGCGTCCATCTTCCAACTGCTTTCCG 266 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGT 33289 ||| |||| |||||||| |||| || || |||||||| || |||| ||| Sbjct 267 GCAAAGATTAGCCGTTGCTGATCCGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCC--- 323 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || ||| ||| |||||| || | ||| || || || || ||||| || || || Sbjct 324 TTCACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGTGTAATTGTTTTCCCGGTTAGG 383 Query 33350 GTTTTTACGAAAATTTGCATG 33370 ||||| || || || |||||| Sbjct 384 GTTTTCACAAAGATCTGCATG 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317702495149050