Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq103000 98.7 7e-16 >seq103000 Length=415 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 ||||| || ||||| ||||| | | || || |||| ||||| || ||||| ||||| Sbjct 213 TCTTTCTGGATATTGTAATCAGAAAGAGTG-CGTCCATCTTCCAACTGCTTTCCGGCAAA 271 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 || | ||||||||| ||| | || | |||||||| ||| ||| ||| || || | Sbjct 272 GATTAGCCGTTGCTGATCCGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTCACATT 331 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 ||| || || | | ||| || |||| ||||||||||| ||||||| || ||||| Sbjct 332 TTCAATGGTGTCGGAGGCCTCAACCTCGAGTGTAATTGTTTTCCCGGTTAGGGTTTTCAC 391 Query 44110 AAATATTTGCATG 44122 ||| || |||||| Sbjct 392 AAAGATCTGCATG 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353581082055300