Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq82596 105 1e-17 >seq82596 Length=456 Score = 105 bits (116), Expect = 1e-17 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 |||||| || | || |||||||| || ||||| |||||||||||||||| | | || Sbjct 247 CCAAGCATCAACTTCCGAGTTGTACGGGAAAGTTCAAGAAATTCCTCAGAAGAGTCA-AC 305 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 ||||| || ||||| ||||| | || || ||| |||| |||||||||||| || Sbjct 306 GCCGTTCTACCCTCGTTCACCTTATGCGGTCGCTAAGATGTATGCTTATTGGATCGTTAT 365 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||| || | || ||||||| | || || || ||||||||||||||| Sbjct 366 CAACTACCGAGAAGCTTACAACATGTTCGCTTGTAATGGTATCCTTTTCAATCACGAGAG 425 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCG 68614 |||| ||||| | ||||| ||||| Sbjct 426 CCCCAGAAGAGGTGAAACATTCGTCACTCG 455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1098969695878750