Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq83363 100 2e-16 >seq83363 Length=456 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||| ||||| || || ||||| |||||||| || ||| | | | ||||| Sbjct 382 AACAAGATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGTCCATCTTC 323 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||| || || | || | |||||| || || |||||||||||||||||| Sbjct 322 AAGCTGTTTTCCGGCAAAGATGAGACGCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTG 263 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| || ||| | || || ||||| ||| || || || || ||||| || Sbjct 262 AATTTTCGCCTTCACATTCTCGATTGTATCAGAGGCTTCCACTTCCAAAGTGATGGTCTT 203 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| |||||||| ||||||||||| Sbjct 202 CCCCGTCAAGGTTTTTACGAAAATTTGCAT 173 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || ||||| ||||| |||||| ||| | | | | ||||| | ||| Sbjct 147 TGAAGGGTTGACTCCTTTTGAATGTTATAATCGGAGAGTGTACGCCCATCTTCAAGTTGC 88 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | ||||||||| || |||||||||||||||||| |||||| Sbjct 87 TTTCCTGCGAAAATAAGACGCTGTTGATCAGGTGGAATTCCTTCCTTGTCCTGAATTTTC 28 Query 15094 CTTTTTACAATTTCTATAGTATC 15116 ||| ||| | || || ||||| Sbjct 27 GCTTTCACATTCTCAATGGTATC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356186664766625