Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_015225.1 Length=35499 Score E Sequences producing significant alignments: (Bits) Value seq265254 113 1e-20 >seq265254 Length=210 Score = 113 bits (124), Expect = 1e-20 Identities = 131/173 (76%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 14623 GACGGCAAGGAGCGCAGTTACAACCTGCTGCCCGACGACAAAAACAACACGGCCTACCGC 14682 ||| ||||| | |||||||||||||| | | | |||| | | ||| |||||| Sbjct 32 GACAGCAAGAA-CGCAGTTACAACCTAATAAGCAATGACAGCACCTTCACCCAGTACCGC 90 Query 14683 AGCTGGTACCTGGCCTACAACTACGGCGACCCCCTCAAGGGCGTGCGCTCGTGGACGCTG 14742 ||||||||||| || ||||||||||||||||| | | || | ||||| ||||| ||| Sbjct 91 AGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCGCTCATGGACCCTG 150 Query 14743 CTGACCACGCCCGACGTGACCTGCGGCTCCGAGCAGGTGTACTGGTCGCTGCC 14795 || ||| || ||||| ||||||||||| |||||| || ||||||| |||| Sbjct 151 CT-TGCACTCCTGACGTAACCTGCGGCTCGGAGCAG--GTCCTGGTCGTTGCC 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113102308081450