Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq50770 208 6e-48 seq135 141 7e-28 seq83363 140 3e-27 seq7796 131 1e-24 seq103000 123 2e-22 seq102 116 3e-20 seq163 98.7 8e-15 seq103970 96.9 3e-14 seq8532 93.3 3e-13 seq309 86.0 5e-11 >seq50770 Length=559 Score = 208 bits (230), Expect = 6e-48 Identities = 380/546 (70%), Gaps = 23/546 (4%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| ||||| ||||| | | || ||||| ||| Sbjct 23 GGAATTGATCTTGGCACCACGTATTCGTGTGTGGGTGTCTTCATGCACGGAAAAGTGGAA 82 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 ||||| |||||||||||||||||| | || || || || |||||| | |||||||| || Sbjct 83 ATTATCGCCAATGATCAAGGTAACCGCACAACACCTTCCTATGTTGCATTCACGGACACA 142 Query 550118 GAAC-ATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATAC 550173 |||| | ||| |||| ||||| || || |||| |||| || |||||| ||| || Sbjct 143 GAACGACTTA-TTGGAGATGCCGCCAAGAATCAGGTGGCCA-TG--AATCCTCACAACAC 198 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | | || ||||| || || || |||||| | | ||| | ||| | | || || | || Sbjct 199 TGTATTCGATGCCAAGCGATTGATTGGACGCAAATTTGACGATCCAGCAGTCCAATCCGA 258 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG---AAAACCTTATATTGAAG- 550289 ||||||||||||||| ||| || |||| | || || ||| | || ||| Sbjct 259 TATGAAGCATTGGCCATTCAAAGTTGTGTCAGCCGAGGGCTCCAAGCCTAAGGTTCAAGT 318 Query 550290 CTACTCATGAAGGATCTGTTAAAC---AATTTTCA--CCAGAACAAATTTCATCTATGGT 550344 | | | |||| | |||| | | |||| || || | || ||||| ||||| Sbjct 319 CGAAT--ACAAGG----GCGAAACCAAAGTCTTCACCCCGGAGGAGATCTCATCAATGGT 372 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 | ||| ||| ||||| | || || ||||| |||| |||| |||||| || Sbjct 373 TCTAACGAAGATGAAGGACACCGCAGAGGCTTTCCTTGGATCTCCTGTTAAGGATGCCGT 432 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || ||||| || || || || || || |||||||| || |||||||||||| Sbjct 433 CGTCACAGTGCCAGCCTACTTCAACGATTCCCAGCGTCAAGCCACCAAAGATGCTGGAGC 492 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| || |||||||||||||| ||||||||||| ||||| ||||| | || || Sbjct 493 CATTGCTGGCCTGAATGTTCTTCGTATCATCAATGAACCAACTGCCGCTGCTATCGCCTA 552 Query 550525 TGGACT 550530 ||||| Sbjct 553 CGGACT 558 >seq135 Length=4864652 Score = 141 bits (156), Expect = 7e-28 Identities = 454/701 (65%), Gaps = 4/701 (1%) Strand=Plus/Minus Query 551900 TCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAAC 551959 |||||| || | |||||||| || | || || | |||| || || | || || Sbjct 2806920 TCGTCGCCTCCGCACTGCTTGTGAGCGTGCTAAGTGCACTCTCTCTTCCAGCACCCAGGT 2806861 Query 551960 CACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGC 552019 || |||||| | ||||| | | ||| | ||| || | |||| || || | | || Sbjct 2806860 CAGTATTGAGATTGATTCCCTCTCTGAAGAAATCGACTTCTATACCTCTGTTACCCGTGC 2806801 Query 552020 CAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT 552079 | ||||||||| | | |||| || || | || | || || || || ||| Sbjct 2806800 CCGATTTGAAGAATTAAATGCTGACCTGTTCTGTGGCACCCTGGACCCTGTGGAGAAAGC 2806741 Query 552080 TTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 | | ||| |||| | || || || | | ||||| ||||| || || || || || Sbjct 2806740 TCCTCGGGATGCAAAACTAGACAAGTCTCAGATCCATGACATTGTCCTGGTGGGAGGCTC 2806681 Query 552140 TACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTA 552197 || | || || || |||| |||| | | || ||| || |||||| ||| || | Sbjct 2806680 AACCCGTATCCCCAAGATTCA-GAAACTTCTGCAGGACTTCTT-CAATGGGAAAGAAGTG 2806623 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 ||| | || |||| || |||||||||||||| |||||||| || | || ||||| ||| Sbjct 2806622 AATAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCAGCCATT 2806563 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTA 552317 | |||||| | | |||||| | ||| | | | || | ||||| |||||||| Sbjct 2806562 TTATCTGGAGACAAATCTGAAAATGTTCAAGACTTGCTGCTATTGGATGTCACTCCTCTT 2806503 Query 552318 TCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT 552377 || ||||| | ||| | | ||| || | ||||| || ||| | | ||||| || Sbjct 2806502 TCCCTTGGAATCGAACCTGCTGGTGGAGTCATGACCGTCCTCATCAAGCGCAATACCACC 2806443 Query 552378 ATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 ||||| ||| | | | || | || || || || || || ||| ||| Sbjct 2806442 ATTCCCACTAAGCAGACGCAAACCTTCACCACCTACTCCGACAACCAGCCTGGTGTGCTC 2806383 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 ||||| ||| ||| || || | | || || ||||| || | |||||| | || Sbjct 2806382 ATTCAGGTTTGTGACGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGGTT 2806323 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | | ||| ||||||||||| || |||| || || || |||||||| ||||| ||| Sbjct 2806322 GAACTCACAGGCATTCCTCCTGCCCCCTGTGGCGTTCCTCAGATTGAAGTCACTTTTGAT 2806263 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | | |||||||||||| | ||||| ||||| ||||| Sbjct 2806262 GTTGGTGCCAATGGAATCCTTGATGTGTCTGCTGTGGATAA 2806222 Score = 125 bits (138), Expect = 6e-23 Identities = 353/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAA-ATGGTAAAGTTGA 550056 || || ||| | || ||||| ||| ||||| |||| || | | | || ||||| || Sbjct 2807683 GGCATTGATCTTGGCACCACCTATTCCTGTGTGGGTGATTTTCTAGCACGGGAAAGTAGA 2807624 Query 550057 AATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAAC 550116 || |||||||||||||| || || ||| || ||| | || ||||||| | | Sbjct 2807623 GATAATTGCCAATGATCAGGGAAATCCAACCACCCCAAGCTGTGCCGCTTTCACCCATAT 2807564 Query 550117 TGAAC-ATTTA--GTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 ||| ||| | ||| |||||| ||||| | |||| || || |||| || Sbjct 2807563 CGAATGATTGATCGTT--TGATGCTGCAAAGAACCAAGTTGAGATGAACCCCACCAGCAC 2807506 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 |||||||||| ||| | | |||||| |||| ||| || || | ||| || | || Sbjct 2807505 AGTTTTTGATGCCAAATGCCTCATTGGACGAAGATTTGATTATGCTGTTGTCCAATCTGA 2807446 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293 || |||||||||||| ||| | || ||| | || | ||| | || ||| | Sbjct 2807445 TACGAAGCATTGGCCCTTCATGGTGGTGAATAACGCAGGCAGGCCTAAGATCCAAGTAAA 2807386 Query 550294 TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 | | ||| ||| || | ||||| | | ||||| ||||||| | || Sbjct 2807385 ATACAAGGGAGAGACAAAAAGCTTGTATCCAGAGGAGGTGTCATCCGTGGTTTTGACAAA 2807326 Query 550354 AATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTG 550412 ||| | ||| || || | |||| |||| ||||| |||| | | | | Sbjct 2807325 GATGGAGGAAATTGCAGAAGCCTACCTTGGG-AAGACTGTTACCAATGCTGATGTCAGAG 2807267 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 |||| | ||||| |||||||| || |||| ||||| |||||||||||| ||||||||| Sbjct 2807266 TACCCACTTATTTCAATGACTCTCAGTGTCAGGCTACCAAAGATGCTGGAAGTATTGCTG 2807207 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | || ||||| ||| | || || ||||| || ||||||||||| |||| |||| Sbjct 2807206 GTCTCAATGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCTGTTGCTAATGG 2807152 >seq83363 Length=456 Score = 140 bits (154), Expect = 3e-27 Identities = 167/222 (75%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| |||||||| ||||| ||| ||||| || ||||| |||| || || Sbjct 391 GAGACGGAGAACAAGATGGAGGGTTGATTCCTTTTGG--ATGTTGTAGTCAGAGAGGGTA 334 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||||||| |||||||||||||| || || | |||||||| || ||||||||| Sbjct 333 CGTCCATCTTCAAGCTGTTTTCCGGCAAAGATGAGACGCTGCTGATCTGGTGGAATTCCT 274 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || ||||||||||| || || ||| |||||||||| | | | || ||| | Sbjct 273 TCCTTGTCTTGAATTTTCGCCTTCACATTCTCGATTGTATCAGAG-GCTTCCACTTCCAA 215 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || || || | ||||| |||||||||||||| Sbjct 214 AGTGATGGTCTTCCCCGTCAAGGTTTTTACGAAAATTTGCAT 173 Score = 111 bits (122), Expect = 1e-18 Identities = 123/162 (76%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| ||||| |||||||| ||| |||| ||| || ||||| | || || | Sbjct 162 AGACGGAGCACAAGGTGAAGGGTTGACTCCTTTTG--AATGTTATAATCGGAGAGTGTAC 105 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||||||||| ||||| || |||||||| | || |||||||| |||||||||| Sbjct 104 GCCCATCTTCAAGTTGCTTTCCTGCGAAAATAAGACGCTGTTGATCAGGTGGAATTCCTT 45 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 | || || |||||||| ||| || |||||| ||||||| Sbjct 44 CCTTGTCCTGAATTTTCGCTTTCACATTCTCAATGGTATCAG 3 >seq7796 Length=1285 Score = 131 bits (144), Expect = 1e-24 Identities = 333/505 (66%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 552081 TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCT 552140 || |||||| | ||||| || || | | || ||||| || || || || || |||||| Sbjct 105 TTGAGAGATGCCAAGATGGACAAGAGCCAGGTTCATGACATCGTCCTGGTCGGAGGATCT 164 Query 552141 ACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAAT 552200 || | ||||| ||| | | | || | | || ||| ||| || || | || Sbjct 165 ACTCGTATTCCCAAAGTGCAGAAGCTGCTGTCTGATTTGTTCTCTGGAAAGGAACTCAAC 224 Query 552201 GAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 |||| | || || ||||||||||||||||| || || || ||||||| ||||||| Sbjct 225 --AAGTCGATCAACCCCGATGAGGCTGTTGCCTACGGAGCAGCGGTTCAAGCCGCTATTC 282 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 |||||||| | | || | ||| || | | ||| | |||||| ||||||| | Sbjct 283 TTTCTGGAGACAAGTCGGAGGCTGTGCAAGATCTCCTCCTTCTTGATGTTGCTCCTCTCT 342 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | |||||| | || || | |||||| | ||||| ||| ||| | || || || || | Sbjct 343 CACTTGGTATTGAGACTGCTGGAGGAGTGATGACAGCTCTGATCAAGAGGAACACCACCA 402 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 |||| || | | || |||| ||||| || || || ||| ||| | Sbjct 403 TTCCAACCAAGACGAGCCAGACCTTCACTACTTATTCCGACAACCAGCCTGGTGTGTTGA 462 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 | || | || ||||||||| | | | || || || || || | || || | || Sbjct 463 TCCAGGTCTTCGAAGGAGAACGTGCAATGACCAAGGACAACAACCTTCTCGGAAAGTTCG 522 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | | || ||||| || || || || || |||||||||||||| ||||| ||||||| Sbjct 523 AGCTGTCTGGAATTCCACCAGCACCACGAGGTGTACCGCAAATTGAGGTTACATTCGATA 582 Query 552559 TCGATGCCAATGGAATTTTGAATGT 552583 | |||||||| || ||| | || || Sbjct 583 TTGATGCCAACGGTATTCTCAACGT 607 >seq103000 Length=415 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| ||||| || |||||| ||||||||||||| ||||| | | Sbjct 186 AGACGGAGAACAAGGTGAAGAGTTGATTCTTTCTGGATATTGTAATCAGAAAGAGTGCGT 245 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | || ||||||||||| || || | ||||||||| || || ||||||||| Sbjct 246 CCATCTTCCAACTGCTTTCCGGCAAAGATTAGCCGTTGCTGATCCGGTGGGATTCCTTCT 305 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || |||||||| ||| || || ||||| || || | | | ||||| ||| Sbjct 306 TTGTCTTGAATCTTTGCCTTCACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGTGTA 365 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || || || ||||| || || || ||||| Sbjct 366 ATTGTTTTCCCGGTTAGGGTTTTCACAAAGATCTGCAT 403 Score = 104 bits (114), Expect = 2e-16 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 ||||| ||||| || |||||||||||||||| |||||||| || || |||||||| || Sbjct 21 TCTTCTAGTTGCTTGCCGGCAAAAATAAGTCGCTGCTGATCTGGTGGGATTCCTTCCTTG 80 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAAC 563438 ||||||||||| ||| || ||| ||||| || | | | | | ||| ||||| | Sbjct 81 TCTTGAATTTTGGCTTTCACATTCTCGATTGTGTCTGAG-GCCTCGACTTCAAGAGTGAT 139 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| ||||| ||||| || || || || ||||| Sbjct 140 TGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 175 >seq102 Length=6315829 Score = 116 bits (128), Expect = 3e-20 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || ||||| || || || |||||||| || ||||| || || Sbjct 2149511 GTTACCAATGCTGTGGTCACAGTACCCGCGTACTTCAATGACTCTCAGCGTCAGGCGACC 2149452 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| ||| | || |||||||| || |||||| Sbjct 2149451 AAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTAGAATCATCAATGAGCCAACTGCT 2149392 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 2149391 GCTGCTATTGCGTATGG 2149375 Score = 98.7 bits (108), Expect = 8e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| ||||| ||||||| || | || ||||| || Sbjct 2150461 GGCATTGATCTTGGCACCACCTATTCCTGTGTGGGTGTTTTCCAGCACGGGAAAGTGGAG 2150402 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| |||||| ||||||| || || Sbjct 2150401 ATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGCTATGTTGCTTTCACCGATACC 2150342 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG 550151 |||| || | |||||||| ||||| | |||| Sbjct 2150341 GAACGGTTGATCGGTGATGCTGCAAAGAACCAAG 2150308 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 552468 ACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGT 552527 || || ||||| || | ||||| | ||| | | ||| ||||||||||| || ||| Sbjct 2148062 ACCAAGGATAACAACCTGCTTGGCAAGTTTGAACTCACAGGCATTCCTCCTGCCCCCCGT 2148003 Query 552528 GGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACT 552587 || || || || |||||||| ||||| ||||| ||||||||||| || | |||||| || Sbjct 2148002 GGCGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAATGGCATCCTTAATGTGTCT 2147943 Query 552588 GCTTGTGATAA 552598 ||| ||||| Sbjct 2147942 GCTGTGGATAA 2147932 >seq163 Length=4142560 Score = 98.7 bits (108), Expect = 8e-15 Identities = 155/217 (71%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 550040 CAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTAT 550099 ||| |||| |||| || |||||||| ||| | ||||| ||| || | |||| |||| Sbjct 3392658 CAACATGGAGAAGTAGAGATTATTGCTAATTACCAAGGCAACTTTACCAGTCCAAGTTAT 3392717 Query 550100 GTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGT 550159 || ||||||| ||| |||||| | | |||| | | || | |||| | ||| Sbjct 3392718 GTAGCTTTCAC--AAAGTGAACACCTGATCAGTGACGTTTCTAAGAACCAAGAGGC-GGT 3392774 Query 550160 AATCCT-ACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC 550218 | ||| |||||||| || |||||||| || || | ||||| | | ||| ||||| | Sbjct 3392775 GAACCTCACCAATACCATCTTTGATGCCAAGAGTCTGATTGGTTGCAAGTTTGATGATGC 3392834 Query 550219 GACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAA 550255 || |||||| |||| | |||||| |||||||||||| Sbjct 3392835 CACAGTTCAGTCAGAAA-GAAGCACTGGCCTTTCCAA 3392870 >seq103970 Length=412 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| ||||| ||||| || ||| | ||| || |||||||| | ||||||| Sbjct 186 AGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGG--ATGTTGTAATCGGACAGAGTTC 129 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| || | ||| |||||||| || ||||| | |||||||||||||| ||||||| Sbjct 128 GGCCATCCTCCAATTGCTTTCCGGCGAAGATAAGACGCTGCTGATCAGGAGGGATTCCTT 69 Query 563375 CTTTATCTTGAATTTT 563390 | ||||| ||||| || Sbjct 68 CCTTATCCTGAATCTT 53 >seq8532 Length=1223 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || || || ||||||||||| | || ||||| || |||| Sbjct 815 ATGCTGTTATTACTGTTCCGGCTTACTTCAATGACTCACAGAGACAGGCTACGAAGGATG 756 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | |||| |||||||| | ||||| || || | ||||| || || || |||||||| | Sbjct 755 CGGGACAAATTGCTGGTTTAAATGTCCTGCGAGTAATCAACGAGCCCACGGCTGCTGCCC 696 Query 550518 TTGCATATGGACTTGATAA 550536 |||| || || | ||||| Sbjct 695 TTGCCTACGGCTTGGATAA 677 >seq309 Length=1376200 Score = 86.0 bits (94), Expect = 5e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||||||||||| | ||| | | |||||| ||||| || || ||||| || ||||| Sbjct 314854 AATATTGTAATCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 314795 Query 563352 TTGCTGATCAGGAGGAATTCCT 563373 |||||| ||||||||||||||| Sbjct 314794 TTGCTGGTCAGGAGGAATTCCT 314773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4014661533970250