Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq221 89.7 7e-13 >seq221 Length=2697352 Score = 89.7 bits (98), Expect = 7e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 197494 ATGGATAAAAGCTACCAGGGTCGTGTCAACA--TTAGCCAAACCAACTACTCTTTGTGCA 197551 |||||||||||||||||||| || || || | || || | ||| ||||||||| | Sbjct 2311873 ATGGATAAAAGCTACCAGGGCCGAGTAAATATCTTCACCCA--GAACAACTCTTTGTCTA 2311930 Query 197552 TTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAAATTAACAAAAATAATT 197611 | | || ||||| ||||| ||||| || || || | ||||| || ||| || |||| Sbjct 2311931 TCAATAAGCTGACTGTGAAAGATGCAGGATCCTACCAAGCCCAGATAAACCAAGTGAATT 2311990 Query 197612 CCCAAGTCACCACCAAGGAGGAATTTACTCTG 197643 | | ||||||| || |||||||| |||||| Sbjct 2311991 CTAATGTCACCAGAAATGAGGAATTCACTCTG 2312022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699759885054000