Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 4e-11 >seq4 Length=22931326 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 ||||||||||| || ||||| || ||||| || ||||| ||||| | ||||||||| Sbjct 4287660 GTAGCCTTTGCGGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATCTTCTGG 4287719 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| || | |||| ||||| || || |||||||| || || || ||||| || Sbjct 4287720 CTCAAGAAG-CGAGGACTGATGCCGGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 4287778 Query 26004 CGAGG 26008 ||||| Sbjct 4287779 CGAGG 4287783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925631867784000