Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq103000 111 3e-19 seq83363 87.8 3e-12 >seq103000 Length=415 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||| ||| || ||||||||||| | || ||| ||||| || || |||||||| || Sbjct 21 TCTTCTAGTTGCTTGCCGGCAAAAATAAGTCGCTGCTGATCTGGTGGGATTCCTTCCTTG 80 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | ||| || || || || | ||| ||||| ||||| || Sbjct 81 TCTTGAATTTTGGCTTTCACATTCTCGATTGTGTCTGAGGCCTCGACTTCAAGAGTGATT 140 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || || || || ||||| || |||||| Sbjct 141 GTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCATT 176 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || || || ||||||||||| |||| | || ||||| || || ||||||||||| Sbjct 248 ATCTTCCAACTGCTTTCCGGCAAAGATTAGCCGTTGCTGATCCGGTGGGATTCCTTCTTT 307 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || || | || | |||| ||| || ||||| | |||||| || || || || Sbjct 308 GTCTTGAATCTTTGCCTTCACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGTGTAAT 367 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| ||||| || ||||| Sbjct 368 TGTTTTCCCGGTTAGGGTTTTCACAAAGATCTGCAT 403 >seq83363 Length=456 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 |||||||||||||| || | | ||| ||||| || || |||||||| || ||||| ||| Sbjct 318 TGTTTTCCGGCAAAGATGAGACGCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGAATT 259 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | || | ||| || ||||| || | || ||||| | ||| || || || || Sbjct 258 TTCGCCTTCACATTCTCGATTGTATCAGAGGCTTCCACTTCCAAAGTGATGGTCTTCCCC 199 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || | |||||||| || |||||||| Sbjct 198 GTCAAGGTTTTTACGAAAATTTGCAT 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896542439202000