Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq103000 87.8 3e-12 >seq103000 Length=415 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || ||||||||||||| || || | |||||||| | || Sbjct 176 AATGCAGATCTTTGTGAAGACTCTGACTGGAAAAACAATCACTCTTGAAGTCGAGGCCTC 117 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || |||||| ||||| ||||| || ||||| || || ||||| || Sbjct 116 AGACACAATCGAGAATGTGAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCAGATCA 57 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977 || || | |||| |||||| ||||| || ||||| Sbjct 56 GCAGCGACTTATTTTTGCCGGCAAGCAACTAGAAGA 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729340409010000