Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq103000 91.5 3e-13 >seq103000 Length=415 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| || | || | || | ||| | ||||| ||||| ||||| Sbjct 174 ATTCCTCCTCGAAGACGGAGAACAAGGTGAAGAGTTGATTCTTTCTGGATATTGTAATCA 233 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || ||||| || || || ||||| |||| | || || || ||| Sbjct 234 GAAAGAGTGCGTCCATCTTCCAACTGCTTTCCGGCAAAGATTAGCCGTTGCTGATCCGGT 293 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| || || || ||||| || || || || | || Sbjct 294 GGGATTCCTTCTTTGTCTTGAATCTTTGCCTTCACATTTTCAATGGTGTCGGAGGCCTCA 353 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| ||||| || |||| ||||| | || |||||||| Sbjct 354 ACCTCGAGTGTAATTGTTTTCCCGGTTAGGGTTTTCACAAAGATCTGCAT 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902005078005000