Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6131 131 1e-25 >seq6131 Length=1503 Score = 131 bits (144), Expect = 1e-25 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 |||| ||||| || |||||| | ||||| | || || || | ||| || ||||| || | Sbjct 252 CAGTTTCCGGATTTTCACATGCTGGACAGAGTACGAATTTCCTGATAAAGCCATCCAGGA 193 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 || || | ||| | | |||||| || ||||||||| | || |||||| | | Sbjct 192 TATCTTGCAGCTTCGCTGCGTCGTGTTCACCATTGACGATGTAACGCTCGTTTCTCGCGT 133 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | | ||||| |||||||||||||| || ||||||||||| || || || | || | Sbjct 132 CATAATTTGTTTGAGCGCCCAGCTCGCAGCCAAAGTACTTTGTTGGATACATAGGAGGGC 73 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 || |||| | || || || || | ||| || | | |||||||||||||||||||| | Sbjct 72 GTTCAAGTGATTTAGCAATGTCAGACATATTCGCTACAACAGTCTTGATGCCGTTGCCTT 13 Query 34559 TTCCTTCGACCT 34570 | ||||| |||| Sbjct 12 TGCCTTCCACCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411449256225425