Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq374 134 4e-26 >seq374 Length=747316 Score = 134 bits (148), Expect = 4e-26 Identities = 296/437 (68%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 54152 ATACCAACCAGCTACTCCAAC-TTTCCTAAATGCTGGTA-GAAGCAGACGCGGAGAAATG 54209 |||||||||||||||||| || ||| |||| |||||||| |||| ||| || ||| | Sbjct 669204 ATACCAACCAGCTACTCCTACCTTTTCTAA-TGCTGGTAAGAAG-AGATCTGGTGAACTT 669147 Query 54210 GTTTCTTGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAATATCAAT 54269 ||||| || || ||| | || | ||| || | | || || ||| | || ||| | Sbjct 669146 GTTTCCTGCTTTTTACTGGAGACGGAAGACTCCATTAACTCCATTAACTACATCATCTCT 669087 Query 54270 ACTGCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAACTTAGA 54329 || | |||||||| || || || || || || || || |||| || ||||| | ||| Sbjct 669086 ACATCGATGCAATTGTCCAAGATAGGGGGAGGTGTAGCTGTAAATCTCTCTAAGTTGAGA 669027 Query 54330 GGAAGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCAGTTATG 54389 || ||| || ||||| || || | ||||||| ||||| | || ||| | Sbjct 669026 GGTAGAGGAGCTTCTATTAAGAAAATAGACAGTACTGCTTCGGGAGTTATTCCTGTTCTA 668967 Query 54390 AAACTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGCGCTGGA 54449 || | | ||| || || |||||| | ||| | ||| |||| ||| |||| Sbjct 668966 AAGATCCTTGAAAATGTATTTGACTATGCTGACCAGTTGGGCATGAGAAGAGGGTCTGGT 668907 Query 54450 GCTGTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAAAAGATC 54509 |||| ||| |||||||||| |||| || |||| || || |||| ||||| || Sbjct 668906 GCTGCCTACCTAAACATCTTTCACTATGACCTTATCGACTTTATAGACTGCAAAAAAATT 668847 Query 54510 AATGCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAA---TTGCTGAAAAA 54566 ||||||||||| || | || |||||| | | ||||| || |||| || |||| || Sbjct 668846 AATGCTGATGAGAAGTCAAGGATTCAAACACTCTCTATAGGTTTAATAGTTCCTGATAA- 668788 Query 54567 ATCTTCTTCCAATTAGC 54583 || || |||||||| Sbjct 668787 --GTTTTTGCAATTAGC 668773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1586266219492800