Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 >seq4 Length=22931326 Score = 111 bits (122), Expect = 1e-19 Identities = 134/177 (76%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| |||||||| | |||||||||| | ||| |||||||| |||| ||| | || Sbjct 4524134 TCCAGCATCTGGGGGCCAACCTGCGATGGCCTGGATCGCATTGTTGAGCGCTGTAACTTG 4524075 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || |||||||||||| | | ||||| |||||||| ||||||| || | Sbjct 4524074 CCCGAGATGCATGTGGGCGACTGGATGCTCTTTGAGAACATGGGTGCTTACA-CTGTCGC 4524016 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296 ||| |||| || || ||||| || ||| || | || | | ||||||| || |||| Sbjct 4524015 TGCTGCTTCCACTTTCAACGGGTT-CCAGAGGCCGACCATCTACTATGTGATGTCAG 4523960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461942166798000