Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq103000 100 2e-16 >seq103000 Length=415 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||||||||| || || |||||| |||||| | || || || | || Sbjct 403 ATGCAGATCTTTGTGAAAACCCTAACCGGGAAAACAATTACACTCGAGGTTGAGGCCTCC 344 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| || || ||| || ||||||||||| | || ||| | Sbjct 343 GACACCATTGAAAAT--GTGAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCGGATC 286 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||||||| |||| ||||||||||| || ||||| || | ||||| | || ||||||| Sbjct 285 AGCAACGGCTAATCTTTGCCGGAAAGCAGTTGGAAGATGGACGCACTCTTTCTGATTACA 226 Query 27968 ACATCCAAAAAGA 27980 | ||||| ||||| Sbjct 225 ATATCCAGAAAGA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354662223474075