Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq49 89.7 2e-13 >seq49 Length=11369404 Score = 89.7 bits (98), Expect = 2e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 52122 CCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTCGTGCCATTTGTA 52180 |||||||| | || | ||| ||||| || | |||| ||| |||| || ||||| |||| Sbjct 7921446 CCCTGCCACGCCCTTTGCCAGTTCTACGTGG-TGAACGGTGAGCTGTCCTGCCAGCTGTA 7921504 Query 52181 TCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCT 52240 |||||||| | |||||| | ||||||| || || ||||| |||||||||||| |||| Sbjct 7921505 CCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAGCTATTCCCTGCT 7921564 Query 52241 GAC 52243 || Sbjct 7921565 CAC 7921567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189471323752250