Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq212344 132 5e-26 seq149 98.7 1e-15 seq4 98.7 1e-15 seq18 86.0 7e-12 >seq212344 Length=260 Score = 132 bits (146), Expect = 5e-26 Identities = 92/103 (89%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 8515 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCC-TCGGCCT 8573 ||||||||||||||||||||||||||||||||||||| |||||| || || ||||||| Sbjct 3 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACCTTCGGCCT 62 Query 8574 CCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 63 CCCAAAGTGCTGGGATTATAGGAATGAGCCACCATGCCCGGCC 105 >seq149 Length=4484336 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | || ||||| | |||| || | Sbjct 2319667 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGGCCAGGCATAAGACCTCTCTTCT 2319608 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||||||||| |||||||| || || || |||||||| || || ||||| ||||||| Sbjct 2319607 TCAGCCAAAATATAGCAGCAAAAGAGCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 2319548 Query 23651 CCAC 23654 |||| Sbjct 2319547 CCAC 2319544 >seq4 Length=22931326 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 || || || ||||| | |||||| |||||||| | || ||||| | |||||| || || Sbjct 4287781 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCCGGCATCAGTCCTCGCTTCTTG 4287722 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || |||| ||||| || || |||||||| || || || || ||||||||||| Sbjct 4287721 AGCCAGAAGATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGCT 4287662 Query 23653 ACAAGACGT 23661 |||| |||| Sbjct 4287661 ACAACACGT 4287653 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || || |||||||| || | |||||||||||||||||| || ||||| || || Sbjct 4285510 ATCTTTAATGTAGGTATCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 4285451 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTC 23861 ||| || || ||||| ||||| | ||||| Sbjct 4285450 AATTTGGAAGCCATAGAAACAACGGGCTTC 4285421 >seq18 Length=15280730 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 9413960 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 9414019 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 9414020 CGCCACCACGCC 9414031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519684140415000