Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 176 5e-39 seq2 168 7e-37 seq3 140 3e-28 >seq6 Length=292091736 Score = 176 bits (194), Expect = 5e-39 Identities = 433/643 (67%), Gaps = 14/643 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || ||| | ||||| ||| | || || || || |||||||| | |||| ||| Sbjct 153785844 GAGCCACTCCTGAGGGAGAATCCCAGGCGCTTTGTCATCTTCCCCATTGAGTACCATGAC 153785903 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || || | |||||| || || || ||||| || |||||||| | ||||||||||| || Sbjct 153785904 ATTTGACACATGTATAAGAAAGCAGAGGCCTCCTTCTGGACAGCTGAGGAGGTGGATCTT 153785963 Query 116696 TCCAAGGACA-CGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 || ||||| | ||| ||||||| ||||| ||||| | ||||| || Sbjct 153785964 TCTAAGGATATTCAGC-ACTGGGAAACTTTGAAGTCTGACGAGAAGTACTTCATATCTCA 153786022 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCG-AGC-GT 116812 |||| | | || || || || || || ||||| || || || ||| |||| | ||| || Sbjct 153786023 CGTGTTAGGGTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAAT-TGGTTGAAGCGGT 153786081 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || || || || || ||||| | || || || |||||||| ||||| || || || ||| Sbjct 153786082 TTAGC-CAAGAAGTACAGGTAACAGAAGCCCGCTGCTTCTATGGCTTCCAAATTGCAATG 153786140 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA-CGTGCGCTCT-TCGG 116930 | || || || ||||||||| || || ||||| || | | || | Sbjct 153786141 GGAAATAGACATTCTGAAATGTATAGTCTTCTTATTGACACATATTAAGGACCCTAAAGA 153786200 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 | | ||| || | || || ||||| || || | || || || ||| |||| || | Sbjct 153786201 AAGGGAATTTC----TCTTCAATGCCATTGAAACACTACCTTGTGTTAAAAAGAAAGCTG 153786256 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | ||||| || | ||||| | | || ||| || | | || || || | | || | Sbjct 153786257 ACTGGGC-CT-TGATGGATTGGGGACAAAGAAGCAACATATGGTGAACGTGTTGCAGCTT 153786314 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 | || || || || || |||||||||| || ||| || ||||||| |||| ||||| Sbjct 153786315 TTGCAGCAGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCCCAAGA 153786374 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 |||| || | ||||| || | ||||| || || | || ||| || |||||| Sbjct 153786375 AACGAGGTTTAATGCCTGGATTAACTTTTTCAAATGAATTTATTAGCAGAGATGAGGGTT 153786434 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA 117213 | ||||| || |||||||| || ||||||| || |||| || Sbjct 153786435 TACATTGTGATTTTGCCTGCTTAATGTTCAAACACCTGGTACA 153786477 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAA 40761 || || || || || ||||| ||||||||| | || || ||| ||| |||| | | | Sbjct 193103443 GTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTAGAACCCAGTGACACCATTGAG 193103502 Query 40762 ACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATC 40821 | |||||| ||| || | |||||||| |||||||| | |||||||| |||| ||| Sbjct 193103503 AATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCAGACCAGCAGAGACTGATC 193103562 Query 40822 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAG 40881 | || || || ||||| || || | || ||||| ||||||||||| || || || Sbjct 193103563 TTTGCCGGGAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAACATTCAAAAAGAA 193103622 Query 40882 GCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| ||||| | || ||||||||||||| || Sbjct 193103623 TCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 193103657 >seq2 Length=541556283 Score = 168 bits (186), Expect = 7e-37 Identities = 430/644 (67%), Gaps = 14/644 (2%) Strand=Plus/Plus Query 116578 GCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACAT 116637 ||| || ||| | ||||| ||| || || || || |||||||| | |||| ||||| Sbjct 435770199 GCCACTCCTGAGGGAGAATCCCAAGCGCTTTGTCATCTTCCCCATTGAGTACCATGACAT 435770258 Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697 |||| |||||| || || | |||| || |||||||| | ||||||||||| || || Sbjct 435770259 TTGGCACATGTATAAGAAATCATAGGCCTCCTTCTGGACAGCTGAGGAGGTGGATCTTTC 435770318 Query 116698 CAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACG 116756 ||||| | | ||| ||||||| ||||| | ||| | ||||| || | Sbjct 435770319 TAAGGATATGCAGC-ACTGGGAAGCTTTGAAGTCTGAGGAGAAGTACTTCATATCTCATG 435770377 Query 116757 TGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC-GTTTC 116815 || | || || || || || || || ||||| | || || ||| |||| |||| |||| Sbjct 435770378 TGTTAGCTTTCTTTGCAGCAAGTGATGGCATAATAAATGAAAATTTGGTGGAGCGGTTTA 435770437 Query 116816 GCTCAGGAGGTGCAGGTGGCCG-AGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 || || || || |||| | | || | || |||||||| ||||| || || | ||||| Sbjct 435770438 GC-CAAGAAGTATAGGTAACAGAAGCCCCGCTGCTTCTATGGCTTCCAAATTGGAATGGA 435770496 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCT-TCGG 116930 || | | || || ||||||||| || || ||||| || | | | || | Sbjct 435770497 GAGCATACATTCTGAAATGTATAATCTTCTTATTGACACTTATATTAAGGACCCTAAAGA 435770556 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 | | ||| || | || || ||||| || || | || || || ||| |||| || | Sbjct 435770557 AAGGGAATTTC----TCTTCAATGCCATTGAAACACTACCTTGTGTTAAAAAGAAAGCTG 435770612 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | ||||| | | ||||| | | || ||| || | | || || | | || || | Sbjct 435770613 ACTGGGCCTTATGATGGATTGGGGACAAAGAAGCAACATATGGTGAACATGTTGTAGCTT 435770672 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 | || || || || || |||||||||| || ||| || ||||||| |||||||||| Sbjct 435770673 TTGCAGCAGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTCAAGA 435770732 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 |||| || | ||||| || | ||||| || || || || ||| || |||| | Sbjct 435770733 AACGAGGTTTAATGCCTGGATTAACTTTTTCAAATGAACTTATTAGCAGAGATGAGGATT 435770792 Query 117171 TGCATTGCGA-CTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA 117213 | ||||| || |||||||| || ||||||| || |||| || Sbjct 435770793 TACATTGTGATTTTTGCCTGCTTAATGTTCAAACACCTGGTTCA 435770836 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520270488 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520270547 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520270548 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520270607 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520270608 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520270667 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520270668 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520270715 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520270716 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520270775 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520270776 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520270835 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520270836 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520270895 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520270896 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520270943 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520270944 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271003 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520271004 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271063 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271064 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271123 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520271124 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271171 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520271172 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271231 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520271232 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271291 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271292 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271351 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520271352 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271399 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520271400 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 520271459 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520271460 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271519 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271520 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271579 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520271580 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271627 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520271628 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271687 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520271688 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271747 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271748 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271807 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520271808 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271855 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520271856 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271915 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520271916 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271975 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271976 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272035 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520272036 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272083 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520272084 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272143 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520272144 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272203 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272204 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272263 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520272264 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272311 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520272312 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272371 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520272372 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272431 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272432 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272491 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520272492 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272539 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 520272540 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272599 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| | |||||| Sbjct 520272600 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272659 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272660 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272719 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || |||| | ||||| ||| Sbjct 520272720 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTTAGGGGTGGC 520272767 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || | || ||||| ||||| ||| | || || ||| ||| Sbjct 204602194 ATGCAGATATTTGTGAAGACCTTGACTGGCAAGACCATTACCCTTGAAGTAGAACCCAGT 204602135 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 204602134 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 204602075 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || ||||| ||||||||| Sbjct 204602074 CAGAGACTGATCTTTGCTGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 204602015 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || || |||| ||||| | || ||||||||||||| || Sbjct 204602014 ATCCAAAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 204601968 Score = 111 bits (122), Expect = 2e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| | || || || ||| Sbjct 253694586 ATGCAGATCTTTGTGAAGACCCTGACAGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 253694527 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | |||||||||||||||||| || ||||| Sbjct 253694526 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCG-ACCAG 253694468 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||| | || | ||| |||||||| || | | |||||| ||||||||| Sbjct 253694467 CAGAGGCTCATATTTGCAGTCAAGCAGCTGGAAGATGGCCACACCCTGTCTGACTACAAC 253694408 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| || || | | ||||| ||| Sbjct 253694407 ATCCAGAAAGAACCCACCCTCCATCTGGTCCTGTGTCTTAGGGGTGGC 253694360 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40725 CATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGA 40784 ||||||| | || || ||| ||| |||| | | | | |||||| ||| || | || Sbjct 230791124 CATCACCCTTGAAGTAGAACCCAGTGACACCATTGAGAATGTCAAGGCAAAGATCCAGGA 230791065 Query 40785 CAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGA 40844 |||||| |||||||| || |||||||| |||| |||| || || || |||||||| || Sbjct 230791064 CAAAGAAGGCATCCCTGCAGACCAGCAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGA 230791005 Query 40845 CGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 | || ||||| ||||||||||||| || || | | ||||| | || |||| Sbjct 230791004 TGGTCGTACCCTGTCTAACTACAACATCCAAAAAGAATCTATCCTGCACTTGGTCCTGCG 230790945 Query 40905 CTTGAGGGGCGG 40916 ||| ||||| || Sbjct 230790944 CTTTAGGGGAGG 230790933 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG-GACCAGCAACGACTCATCTAC 40824 |||||| ||| || | |||||||| ||||||||| | |||||||| |||| |||| Sbjct 478143547 TCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCCAGACCAGCAGAGACTGATCTTT 478143606 Query 40825 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCC 40884 || | || ||||| || || | | |||| ||||||||||||||||| || || Sbjct 478143607 GCCAGTAAGCAGCTAGAAGATGGTCATTCCCTGTCTGACTACAACATCCAGAAAGAATCC 478143666 Query 40885 ACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||| | || | |||||||||| || Sbjct 478143667 ACCCTGCACTTGGTCCTAGGCTTGAGGGGAGG 478143698 >seq3 Length=527952102 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 475401055 ATGCAGATATTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTAGAACCCAGT 475401114 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | |||||||| |||||||| | |||||| Sbjct 475401115 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCAGACCAG 475401174 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || ||||| ||||||||| Sbjct 475401175 CAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475401234 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || || |||| ||||| | || ||||||||||||| || Sbjct 475401235 ATCCAAAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 475401281 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||| ||| | || || ||| ||| Sbjct 475400371 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATTACCCTTGAAGTAGAACCCAGT 475400430 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 475400431 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 475400490 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || ||||| || || | |||||||| ||||||||| Sbjct 475400491 CAGAGACTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 475400550 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || | || || || |||| | || | ||||| ||| Sbjct 475400551 ATCCAGAAAGAATCAACTCTTCACTTAGTCCTTCGTCTCAGGGGTGGC 475400598 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 475399915 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAGT 475399974 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 475399975 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400034 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || ||||| || || | || ||||| ||||||||| Sbjct 475400035 CAGAGACTGATCTTTGCCGGGAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAAC 475400094 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || |||| ||||| Sbjct 475400095 ATCCAGAAAGAATCCACCCTGCA 475400117 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || |||||||||||| | || || ||| ||| Sbjct 475400599 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAAACCATCACCCTTGAAGTAGAACCCAGT 475400658 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 475400659 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 475400718 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || ||||| || || | || ||||| ||||||||| Sbjct 475400719 CAGAGACTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAAC 475400778 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || |||| |||| Sbjct 475400779 ATCCAGAAAGAATCCACCTTGCA 475400801 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| ||||||||| | || || || ||| Sbjct 475400827 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 475400886 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 475400887 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400946 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || ||||| ||||||||| Sbjct 475400947 CAGAGACTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475401006 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || |||| ||||| Sbjct 475401007 ATCCAGAAAGAATCCACCCTGCA 475401029 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||| ||| | || || || ||| Sbjct 475400143 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAAGTGGAGCCCAGT 475400202 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| ||| || | |||||||| ||||||||| | |||||| Sbjct 475400203 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400262 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || ||||| ||||||||| Sbjct 475400263 CAGAGACTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475400322 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || |||| |||| Sbjct 475400323 ATCCAGAAAGAATCCACCTTGCA 475400345 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || | || ||||| ||||||||| | || || || ||| Sbjct 475399686 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAG 475399745 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | |||||| ||||| | ||||| || ||||| ||| | ||||| Sbjct 475399746 TGATACCATTGAGAATGTCAAGGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 475399805 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || ||||| || || | ||| ||| | |||||||| Sbjct 475399806 GCAGAGATTGATCTTTGCCGGGAAGCAGCTAGAAGATGGGCGAACCTTGTCTGACTACAA 475399865 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| || |||| |||| Sbjct 475399866 CATCCAGAAAGAATCCACCTTGCA 475399889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515186895756160