Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 5e-15
>seq1
Length=748055161
Score = 96.9 bits (106), Expect = 5e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595
|| ||||| || || |||||||| | || || || || || ||| | ||| ||||| |
Sbjct 532227476 ACGATGCAGATTTTCATAAAGACTTTGACGGGGAAGACCATCACTCTTGAGGTTGAACCG 532227535
Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
||||| ||| ||| | || || || |||||||| |||||||| || ||||||
Sbjct 532227536 TCCGATACTATTGAAAATGTCAAGGCCAAGATACAAGATAAGGAAGGTATTCCTCCTGAT 532227595
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||||||| | |||||||| || || || || || ||| | || || ||| | ||
Sbjct 532227596 CAACAAAGATTGATTTTTGCTGGCAAGCAGTTGGAAGATGGACGTACTTTATCTGCCTAC 532227655
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||||| || || || || | ||| | |||
Sbjct 532227656 AACATTCAGAAGGAGTCTACCCTTCATCTTGTT 532227688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755408632908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |