Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq3 113 5e-20 seq2 107 2e-18 seq1 96.9 4e-15 seq8 91.5 2e-13 seq7 89.7 6e-13 >seq6 Length=292091736 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || |||| ||||| |||| ||| || |||||||| ||||| |||| | Sbjct 193103657 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 193103598 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || ||||||||||| || || || || |||| ||||||||| | || Sbjct 193103597 AGGGTACGACCATCTTCTAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGG 193103538 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || |||||| ||| ||| |||| || | | ||||| || | ||| || Sbjct 193103537 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACT 193103478 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 || | |||||||| ||||| || || ||||| ||| Sbjct 193103477 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 193103442 >seq3 Length=527952102 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| ||||| ||| || || || || ||||| |||| | Sbjct 475400369 CCACCTCTGAGACGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400310 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||| || || || |||| ||||||||| | || Sbjct 475400309 AGGGTACGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400250 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || |||||| ||| ||| |||| || | | || || || | ||||| Sbjct 475400249 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475400190 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 475400189 TCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 475400143 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | ||||| ||||| ||| || || || || ||||| |||| | Sbjct 475400825 CCACCCCTGAGACGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400766 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||||||||||||| || || || |||| ||||||||| | || Sbjct 475400765 AGGGTACGACCATCTTCTAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400706 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| ||| |||| || | | ||||| || | ||| || Sbjct 475400705 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACT 475400646 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 475400645 TCAAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 475400599 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | ||||| |||| ||| || || || || ||||| |||| | Sbjct 475400141 CCACCCCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400082 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || ||||||||||| || || || || |||| ||||||||| | || Sbjct 475400081 AGGGTACGACCATCTTCTAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400022 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || |||||| ||| ||| |||| || | | || || || | ||||| Sbjct 475400021 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475399962 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 475399961 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 475399915 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| |||| ||| || || || || ||||| |||| | Sbjct 475401053 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400994 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||| || || || |||| ||||||||| | || Sbjct 475400993 AGGGTACGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400934 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || |||||| ||| ||| |||| || | | || || || | ||||| Sbjct 475400933 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475400874 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| |||||||| ||||| Sbjct 475400873 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 475400827 Score = 105 bits (116), Expect = 8e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | ||||| ||||| ||| || || || || ||||| |||| | Sbjct 475399913 CCACCCCTGAGACGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475399854 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || ||| | || ||||||||||| || || || || | || ||||||||| | || Sbjct 475399853 AAGGTTCGCCCATCTTCTAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGA 475399794 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||| |||||| |||| || | | || || || | ||||| Sbjct 475399793 ATGCCTTCCTTGTCTTGGATTTTAGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475399734 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||||| ||||| || | ||||| |||||||| |||||| Sbjct 475399733 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATT 475399686 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 475372073 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 475372014 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 475372013 TACTAACGAGGA 475372002 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 475375870 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 475375811 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 475375810 TACTAACGAGGACTG 475375796 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || ||||| |||| ||| || || | || |||||||||||||| || || Sbjct 475400561 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTACCGGCAAAG 475400502 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| ||||||||| | || | || || ||||| ||| ||| |||| || Sbjct 475400501 ATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTC 475400442 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || | ||| || || | || ||||| ||||| || | ||||| || Sbjct 475400441 TCAATGGTGTCACTGGGTTCTACTTCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTCACG 475400382 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 475400381 AAGATCTGCAT 475400371 >seq2 Length=541556283 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || ||||||| | ||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct 457488942 TTCCTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACCA 457488883 Query 60123 CTATACTACCGAGGATTGAATA 60144 |||||||| |||||| ||||| Sbjct 457488882 CTATACTAACGAGGACAGAATA 457488861 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || ||||||| | ||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct 457479327 TTCCTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACCA 457479268 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 457479267 CTATACTAACGAGGA 457479253 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 52145854 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52145795 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52145794 TATACTAACGAGGA 52145781 Score = 102 bits (112), Expect = 9e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 52179598 TTGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 52179539 Query 60122 ACTATACTACCGAGGATTGAATAT 60145 ||||||||| |||||| | | ||| Sbjct 52179538 ACTATACTAACGAGGAGTCAGTAT 52179515 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52060114 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52060173 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52060174 TATACTAACGAGGA 52060187 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52073171 TTCTCCCCGTCCGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52073112 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52073111 TATACTAACGAGGA 52073098 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52094742 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52094801 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52094802 TATACTAACGAGGA 52094815 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52101434 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52101493 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52101494 TATACTAACGAGGA 52101507 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52108265 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52108206 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52108205 TATACTAACGAGGA 52108192 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52125471 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52125412 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52125411 TATACTAACGAGGA 52125398 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 52128451 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 52128392 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 52128391 TATACTAACGAGGA 52128378 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 52205803 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 52205744 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 52205743 TACTAACGAGGA 52205732 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 108442192 TTCTCCCCGTCGGGGAATTGAACCCAGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 108442133 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 108442132 TATACTAACGAGGA 108442119 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 457432573 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 457432632 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 457432633 TACTAACGAGGA 457432644 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 52098316 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 52098375 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 52098376 ATACTAACGAGGA 52098388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 52032871 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 52032812 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 52032811 TACTAACGAGGA 52032800 Score = 95.1 bits (104), Expect = 1e-14 Identities = 74/87 (85%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 60056 GAAAAATT-----TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||||||| |||||| || | |||||| |||||| ||||||||||||||||||||| Sbjct 52129056 GAAAAATTGTAAATTCTCCCCGTCGGGGAATTGAACCC-GGTCTCCCGCGTGACAGGCGG 52128998 Query 60111 ACATACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||| |||||| Sbjct 52128997 GGATACTCACCACTATACTAACGAGGA 52128971 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | || || |||| ||| | ||| || || || || ||||| |||| | Sbjct 253694361 CCACCCCTAAGACACAGGACCAGATGGAGGGTGGGTTCTTTCTGGATGTTGTAGTCAGAC 253694420 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | | || || |||||||| | || |||||||| | ||||||||||| || Sbjct 253694421 AGGGTGTGGCCATCTTCCAGCTGCTTGACTGCAAATATGAGCCTCTGCTGGTCGG-GGGG 253694479 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||| ||||| |||||| || | || | | ||||| || | ||||| Sbjct 253694480 ATGCCCTCTTTGTCTTGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACC 253694539 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || || ||||| |||||||| ||||| Sbjct 253694540 TCCAGGGTGATGGTCTTACCTGTCAGGGTCTTCACAAAGATCTGCAT 253694586 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | ||||||||||||| ||| ||||||||||| |||| ||||||||||||| Sbjct 457466928 CTCCTCGTCGGGGAATCGAACCCCAATCTTCCGCGTGACAGTCGGAGATACTCACCACTA 457466987 Query 60126 TACTACCGAGGA-TTGA 60141 ||||| ||||| |||| Sbjct 457466988 TACTAAGGAGGACTTGA 457467004 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||||||||||||||||| ||||||||||| || ||||| |||||| Sbjct 468417511 CTCCCCGTCGGGGAATCGAACCCTGGTCTCTCGCGTGACAGGTGGGGATACTTGCCACTA 468417570 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 468417571 TACTAACGAGGA 468417582 >seq1 Length=748055161 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||||||||||||||||| | |||||||||||| ||||||||| Sbjct 618097188 TTTCCTCCCCGTCGGGGAATCGAACCCTGGTCTCTCACGTGACAGGCGGGGATACTCACC 618097129 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 618097128 ACTATACTAACGAGGA 618097113 >seq8 Length=312544902 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 76015257 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 76015198 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 76015197 ATACTAACGAGGA 76015185 >seq7 Length=260857928 Score = 89.7 bits (98), Expect = 6e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 || ||| ||||| | ||||||||||||||||||||| | ||||||||| || |||||| Sbjct 208016448 AACTTTCCTCCTTGTTGGGGAATCGAACCCTGGTCTCCTGAGTGACAGGCAGAGATACTC 208016389 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| | |||| Sbjct 208016388 ACCACTATACTAACTAGGA 208016370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571781747036480