Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 113 3e-20 seq3 109 4e-19 seq6 96.9 3e-15 seq1 95.1 9e-15 seq7 93.3 3e-14 >seq2 Length=541556283 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||||||||| ||||||||||| | || || || |||| Sbjct 204601983 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGACAGGGTACGACCATCT 204602042 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| ||||| || || || ||| | |||||| || || Sbjct 204602043 TCCAGCTGCTTCCCAGCAAAGATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCT 204602102 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| ||| || ||||| ||| ||| | Sbjct 204602103 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACTTCAAGGGTAATGGTC 204602162 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| || || ||||| || ||||| Sbjct 204602163 TTGCCAGTCAAGGTCTTCACAAATATCTGCAT 204602194 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520270699 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520270640 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520270639 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520270580 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520270579 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520270520 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520270519 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520270488 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520270927 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520270868 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520270867 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520270808 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520270807 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520270748 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520270747 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520270716 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520271155 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520271096 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520271095 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520271036 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520271035 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520270976 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520270975 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520270944 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520271383 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520271324 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520271323 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520271264 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520271263 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520271204 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520271203 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520271172 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520271611 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520271552 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520271551 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520271492 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520271491 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 520271432 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520271431 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520271400 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520271839 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520271780 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520271779 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520271720 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520271719 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520271660 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520271659 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520271628 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520272067 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520272008 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520272007 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520271948 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520271947 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520271888 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520271887 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520271856 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520272295 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520272236 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520272235 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520272176 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520272175 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520272116 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520272115 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520272084 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520272523 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520272464 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520272463 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520272404 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520272403 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520272344 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520272343 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520272312 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || |||||||| || ||||||||||| | || || | |||| Sbjct 520272751 AGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 520272692 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| || || || Sbjct 520272691 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 520272632 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| |||||||| |||||| || | ||||||| | Sbjct 520272631 TGGATTTTGGCCTTTACATTCTCAATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 520272572 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 520272571 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 520272540 Score = 84.2 bits (92), Expect = 2e-11 Identities = 129/183 (70%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || | ||||||||||| |||||||||| | || || || |||| Sbjct 230790948 AGGACCAAGTGCAGGATAGATTCTTTTTGGATGTTGTAGTTAGACAGGGTACGACCATCT 230791007 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| ||||| || || || | || | |||||| || || Sbjct 230791008 TCCAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGCAGGGATGCCTTCTTTGTCC 230791067 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG-CT 18292 || | | |||||| | ||| ||||||| ||| || ||||| ||||||| || Sbjct 230791068 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACTTCAAGGGTGATGTCT 230791127 Query 18293 TTT 18295 ||| Sbjct 230791128 TTT 230791130 >seq3 Length=527952102 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| |||| ||| | || |||||||| || ||||||||||| | | Sbjct 475399913 CCACCCCTGAGACGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475399854 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||| | || || || ||| |||| | ||| || || || ||| Sbjct 475399853 AAGGTTCGCCCATCTTCTAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGA 475399794 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || |||| |||||| | ||| || |||| |||||| | Sbjct 475399793 ATGCCTTCCTTGTCTTGGATTTTAGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475399734 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 |||| ||||||| | ||||| ||||| || || ||||| || |||||| Sbjct 475399733 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATT 475399686 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||| || || |||||||| || ||||||||||| | || || || ||| Sbjct 475401039 AAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATC 475400980 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || || || ||| |||| ||||| || || || ||| | |||||| || || Sbjct 475400979 TTCCAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTC 475400920 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | | |||||| | ||| || |||| |||||| ||| | ||||||| | Sbjct 475400919 CTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACTTCCAGGGTGATGGT 475400860 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| || || ||||| || ||||| Sbjct 475400859 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 475400827 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| |||| ||| || || |||||||| || ||||||||||| | | Sbjct 475400141 CCACCCCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400082 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| | || || || ||| |||| ||||| || || || ||| Sbjct 475400081 AGGGTACGACCATCTTCTAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400022 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| || || || | | |||||| | ||| || |||| |||||| | Sbjct 475400021 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACT 475399962 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | ||||| |||| || || ||||| || ||||| Sbjct 475399961 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 475399915 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| || | |||||| ||||||||||| || ||||||||||| | | Sbjct 475400597 CCACCCCTGAGACGAAGGACTAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCAGAC 475400538 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| | || || || ||| |||| ||||| || || || ||| Sbjct 475400537 AGGGTGCGACCATCTTCTAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400478 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| || || || | | |||||| | ||| ||||||| ||| || | Sbjct 475400477 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACT 475400418 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| ||| | ||||| ||||| || || || || || ||||| Sbjct 475400417 TCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 475400371 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| |||| ||| | || |||||||| || ||||||||||| | | Sbjct 475400825 CCACCCCTGAGACGAAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 475400766 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| | || || || ||| |||| ||||| || || || ||| Sbjct 475400765 AGGGTACGACCATCTTCTAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 475400706 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| || || || | | |||||| | ||| ||||||| ||| || | Sbjct 475400705 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACT 475400646 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| |||| || ||||| || || ||||| || ||||| Sbjct 475400645 TCAAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 475400599 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||||||||| ||||||||||| | || || || |||| Sbjct 475401266 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGACAGGGTACGACCATCT 475401207 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| ||||| || || || || | |||||| || || Sbjct 475401206 TCCAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 475401147 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| ||| || ||||| ||||||| | Sbjct 475401146 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACTTCAAGGGTGATGGTC 475401087 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 475401086 TTGCCAGTCAGGGTCTTCACAAATATCTGCAT 475401055 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||| | || |||||||| || ||||||||||| | || || || ||| Sbjct 475400355 AAGGACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATC 475400296 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || || || ||| |||| ||||| || || || ||| | |||||| || || Sbjct 475400295 TTCCAGCTGCTTACCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTC 475400236 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | | |||||| | ||| || |||| |||||| ||||| ||| ||| | Sbjct 475400235 CTGGATCTTTGCCTTGACATTCTCAATGGTATCACTGGGCTCCACTTCAAGGGTAATGGT 475400176 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 475400175 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 475400143 >seq6 Length=292091736 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||||||||||||||||||||| | || || || |||| Sbjct 193103642 AGGACCAAGTGCAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAGGGTACGACCATCT 193103583 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| |||| ||||| || || || || | |||||| || || Sbjct 193103582 TCTAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 193103523 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| ||| || ||||| ||||||| | Sbjct 193103522 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACTTCAAGGGTGATGGTC 193103463 Query 18294 TTGCCGGTCAATGTTTTTACA 18314 ||||| |||| || || ||| Sbjct 193103462 TTGCCAGTCAGGGTCTTCACA 193103442 >seq1 Length=748055161 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/209 (70%), Gaps = 7/209 (3%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || || || |||||||| || ||||||||||| | || ||| || || Sbjct 466159664 ACCAAGTACAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACA-GGTTATA------TCT 466159612 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||||| || ||| |||| ||||| || | |||| ||| | || ||| || || Sbjct 466159611 AGCTGTTTACCAGCAAAGATCAGTCTCTGCTACTCCAGGGGAATGCATTCTTTGTCTTGG 466159552 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | | |||||| | ||| |||||||| |||||| ||||| ||||||| | || Sbjct 466159551 ATCTTTGCCTTGACATTCTCAATAGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTA 466159492 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || ||||| || ||||| Sbjct 466159491 CCAGTCAAGGTCTTCACAAAGATCTGCAT 466159463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 18102 CCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATT 18161 ||||| || || || || | ||||| || || || || |||||||||||| | | | Sbjct 532227702 CCCCGAAGCCTCAGAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGGCAGATAAA 532227643 Query 18162 GTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACG 18221 || | ||||||||| || ||||| ||| | || | |||||||||||| || | Sbjct 532227642 GTACGTCCATCTTCCAACTGCTTGCCAGCAAAAATCAATCTTTGTTGATCAGGAGGAATA 532227583 Query 18222 CCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCA 18281 ||||||||||| || | |||||| | | ||| ||| || || || ||| Sbjct 532227582 CCTTCCTTATCTTGTATCTTGGCCTTGACATTTTCAATAGTATCGGACGGTTCAACCTCA 532227523 Query 18282 ATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | |||||| | || || ||||| || |||| ||||| ||||| Sbjct 532227522 AGAGTGATGGTCTTCCCCGTCAAAGTCTTTATGAAAATCTGCAT 532227479 >seq7 Length=260857928 Score = 93.3 bits (102), Expect = 3e-14 Identities = 172/251 (69%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 18084 TTTTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA 18143 || |||||||| | || ||||| || || || || | ||||| || || || || ||| Sbjct 194049692 TTCTCTTTTTGGCA-CCACCCCGAAGCCTCAGAACAAGATGAAGGGTGGACTCCTTCTGA 194049634 Query 18144 ATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTT 18203 ||||||||||| | | || | | ||||||||| || ||||| ||| |||| | | || Sbjct 194049633 ATGTTGTAGTCAGATAAAGTATGCCCATCTTCCAACTGCTTGCCAGCAAAGATCAATTTT 194049574 Query 18204 TGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTG 18263 |||||||| || | ||||||||||| || | |||||| | | ||| ||| Sbjct 194049573 TGTTGATCAGGAGGAATACCTTCCTTATCTTGTATCTTGGCCTTGACATTTTCAATAGTA 194049514 Query 18264 TCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGC 18323 ||| | | | ||| |||||| | || || ||||| || || | ||||| ||| Sbjct 194049513 TCAGACAGTTTGACCACAAGAGTGATGGTCTTCCCTGTCAAAGTCTTCATGAAAATCTGC 194049454 Query 18324 ATTTTTAAACT 18334 ||| | | ||| Sbjct 194049453 ATTGTGACACT 194049443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379320809752920