Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 >seq3 Length=527952102 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| || |||||||||||| ||||| ||||| ||||| ||||| | ||| | Sbjct 368168861 CCTCGTCTCGACTGATGAGTTCATTGGAGAAAGTGAGTCCAGGCATAAGACCTCTCTTTT 368168920 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 | | |||||| || ||| ||| |||||||||||||| || || |||||| || || | Sbjct 368168921 TAAGCCAGAATATAGCAGCAAAAGAACCCGAGAAGAAAATCCCTTCCACAGCAGCAAAAG 368168980 Query 126186 CAA 126188 ||| Sbjct 368168981 CAA 368168983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597316145929280