Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 9e-16 >seq6 Length=292091736 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| ||||| || | || || ||||||||||| ||||| || || || ||| Sbjct 193103648 AAGCGCAGGACCAAGTGCAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAGGGTACGA 193103589 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| |||||||| || || || |||||| || |||||| || ||||| ||||| || Sbjct 193103588 CCATCTTCTAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCTTCT 193103529 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 |||||| ||| || ||||| | || | |||||| | || ||||| | ||| Sbjct 193103528 TTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGTTCTACTTCAAGGGTG 193103469 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACA 127102 | || ||||| ||||| || || ||| Sbjct 193103468 ATGGTCTTGCCAGTCAGGGTCTTCACA 193103442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475470986099840