Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 205 9e-48 seq2 188 7e-43 seq3 122 9e-23 seq7 87.8 2e-12 >seq6 Length=292091736 Score = 205 bits (226), Expect = 9e-48 Identities = 633/967 (65%), Gaps = 18/967 (2%) Strand=Plus/Minus Query 132549 CTAAAAGTCCGCATCCAAAGTAAAGGTGTCGTCCTTGGCAA---ACATCACGCCAAATTT 132605 ||| ||||| |||||||| ||||| | | || | | | ||||||| || | | | Sbjct 153786799 CTAGAAGTCTGCATCCAAGGTAAAAGAATTTTCAGTTGGACTTGACATCACTCCCATTCT 153786740 Query 132606 TTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGT 132665 |||||||| || || | ||||| || || |||||||| || ||||| || || | | Sbjct 153786739 CTGATATTCTCCTACTCTCTTCTCGAAGAAGTTAGTTTTCCCTTCCAAAGAGAT-ATC-- 153786683 Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAG 132725 ||||||||| || | || ||| | | |||| | || || | | || Sbjct 153786682 CATAAAATCAAATAGATTTTCTGCTCTAAAAATCTTGCTAAAAGCTAGTTCCAACATAAG 153786623 Query 132726 CCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACG 132785 ||||| || || || ||||| |||||| ||| |||||| | ||| | || Sbjct 153786622 TCTGTCTGCTACAAATTCGATATATTGCTTCATTAAAGTGCAATTCATTCCAATCAACTT 153786563 Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTC 132845 || |||| ||||| || | ||| || || || || || | | || ||||| Sbjct 153786562 TACAGGCAAAGCTTCAGTCAAAAACTCCTGTTCTATTCTAACAGCATTGACGATCATTTC 153786503 Query 132846 CCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTC 132905 | || || | ||| || |||| || |||||||| ||||| ||||| || Sbjct 153786502 TTTCACTTTTTCCTCTGAAGGCTTGTGTACCAGGTGTTTGAACATTAAGCAGGCAAAATC 153786443 Query 132906 GCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAG 132965 ||||| || ||||| || ||| ||| | ||| || ||||| || || ||||| | Sbjct 153786442 ACAATGTAAACCCTCATCTCTGCTAATAAATTCATTTGAAAAAGTTAATCCAGGCATTAA 153786383 Query 132966 GCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGAC 133025 || ||||| ||| |||| ||||||| || ||| || |||||||||| || || || Sbjct 153786382 ACCTCGTTTCTTGGGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAAC 153786323 Query 133026 GGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAG 133085 || || ||||| | | || || || | || ||||||||| | ||||| | || Sbjct 153786322 TGCTGCAAAAGCTGCAACACGTTCACCATATGTTGCTTCTTTGTCCCCAATCCATCA-AG 153786264 Query 133086 CGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAG 133145 ||||| || || || | ||| || || || | ||||| ||||| || || | || Sbjct 153786263 -GCCCAGTCAGCTTTCTTTTTAACACAAGGTAGTGTTTCAATGGCATTGAAGA----GAA 153786209 Query 133146 TTTCTCTTCCG--AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203 ||| ||| | ||| | || ||||| || || ||||||||| || ||| Sbjct 153786208 ATTCCCTTTCTTTAGGGTCCTTAATATGTGTCAATAAGAAGACTATACATTTCAGAATGT 153786149 Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263 || |||| || ||||| ||||| || ||||| || || || ||||| |||||| Sbjct 153786148 CTATTTCCCATTGCAATTTGGAAGCCATAGAAGCAGCGGGCTTCTGTTACCTGTACTTCT 153786089 Query 133264 TGAGCGAAAC-GCT-CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGG 133321 || || |||| ||| | |||| |||||| || || ||||| || || || || || || Sbjct 153786088 TG-GCTAAACCGCTTCAACCA-ATTTTCATTTACTATGCCATCACTTGCTGCAAAGAACC 153786031 Query 133322 CCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGT 133381 | | |||||| ||||| | ||||| ||||| ||||||| | | | Sbjct 153786030 CTAACACGTGAGATATGAAGTACTTCTCGTCAGACTTCAAAGTTTCCCAGTGCTGAATAT 153785971 Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 |||| || || ||||||||||| | ||||| || || ||||| ||||| || ||||| Sbjct 153785970 CCTTAGAAAGATCCACCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCTTTCTTATACATGT 153785911 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 || ||||| || | ||||| || || ||||| || | ||| || || | || | Sbjct 153785910 GTCAAATGTCATGGTACTCAATGGGGAAGATGACAAAGCGCCTGGGATTCTCCCTCAGGA 153785851 Query 133502 GCGGCTC 133508 | ||||| Sbjct 153785850 GTGGCTC 153785844 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAA 38315 || || || || || ||||| ||||||||| | || || || ||| |||| | | | Sbjct 193103443 GTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTAGAACCCAGTGACACCATTGAG 193103502 Query 38316 ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATT 38375 | | || | ||| |||| |||||||| || || || | ||||| ||| | || || Sbjct 193103503 AATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCAGACCAGCAGAGACTGATC 193103562 Query 38376 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAA 38435 | || || || ||||| || || | || ||||| ||||||||||| ||||| ||| Sbjct 193103563 TTTGCCGGGAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAACATTCAAAAAGAA 193103622 Query 38436 GCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || ||||| ||||| ||||| ||||| || || Sbjct 193103623 TCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 193103657 >seq2 Length=541556283 Score = 188 bits (208), Expect = 7e-43 Identities = 417/618 (67%), Gaps = 12/618 (2%) Strand=Plus/Minus Query 132871 TGCACCAAATGCTTGAACATCAAGCAAGCAAAG-TCGCAATGCAAGCCCTCGTCCCTGGA 132929 || |||| || |||||||| ||||| ||||| || ||||| || |||| || ||| Sbjct 435770836 TGAACCAGGTGTTTGAACATTAAGCAGGCAAAAATCACAATGTAAATCCTCATCTCTGCT 435770777 Query 132930 AATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATAT 132989 ||| ||||| || ||||| || || ||||| | || ||||| |||||||| ||||| Sbjct 435770776 AATAAGTTCATTTGAAAAAGTTAATCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATAT 435770717 Query 132990 GGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049 || || ||| || |||||||||| || || || || || ||||| || | | || Sbjct 435770716 GGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAAGCTACAACATGTTC 435770657 Query 133050 GCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC 133109 || | || ||||||||| | ||||| | | ||||| || || || | ||| || Sbjct 435770656 ACCATATGTTGCTTCTTTGTCCCCAATCCATCATAAGGCCCAGTCAGCTTTCTTTTTAAC 435770597 Query 133110 GCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCG--AGGAACGC--A 133165 || || | ||||| ||||| || || | || ||| ||| | ||| | | Sbjct 435770596 ACAAGGTAGTGTTTCAATGGCATTGAAGA----GAAATTCCCTTTCTTTAGGGTCCTTAA 435770541 Query 133166 CGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225 || ||||| || || ||||||||| || |||| | ||||||| | ||||| | Sbjct 435770540 TATAAGTGTCAATAAGAAGATTATACATTTCAGAATGTATGCTCTCCATTCCAATTTGGA 435770481 Query 133226 AGCCGTAAAAGCACCGCGCCT-CGACCACCTGCACTTCTTGAGCGAAAC-GCTCGACCAG 133283 |||| || ||||| || | || | |||| |||||||| || |||| |||| |||| Sbjct 435770480 AGCCATAGAAGCAGCGGGGCTTCTGTTACCTATACTTCTTG-GCTAAACCGCTCCACCAA 435770422 Query 133284 ATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATG 133343 |||||| || | ||||| || || || || || || || | ||| || ||||| | Sbjct 435770421 ATTTTCATTTATTATGCCATCACTTGCTGCAAAGAAAGCTAACACATGAGATATGAAGTA 435770362 Query 133344 GCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | ||||| ||||||| || | ||||| || || ||||||||||| Sbjct 435770361 CTTCTCCTCAGACTTCAAAGCTTCCCAGTGCTGCATATCCTTAGAAAGATCCACCTCCTC 435770302 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTAT 133463 | ||||| || || |||| | ||| || ||||| ||| ||||| || | || Sbjct 435770301 AGCTGTCCAGAAGGAGGCCTATGATTTCTTATACATGTGCCAAATGTCATGGTACTCAAT 435770242 Query 133464 GGGAAAAATCACAAACCG 133481 ||| || || ||||| || Sbjct 435770241 GGGGAAGATGACAAAGCG 435770224 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520270488 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520270547 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520270548 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520270607 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520270608 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520270667 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520270668 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520270715 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520270716 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520270775 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520270776 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520270835 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520270836 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520270895 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520270896 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520270943 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520270944 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271003 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520271004 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271063 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271064 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271123 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520271124 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271171 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520271172 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271231 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520271232 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271291 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271292 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271351 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520271352 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271399 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520271400 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 520271459 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520271460 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271519 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271520 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271579 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520271580 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271627 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520271628 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271687 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520271688 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271747 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271748 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520271807 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520271808 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520271855 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520271856 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520271915 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520271916 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520271975 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520271976 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272035 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520272036 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272083 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520272084 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272143 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520272144 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272203 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272204 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272263 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520272264 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272311 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520272312 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272371 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520272372 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272431 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272432 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272491 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520272492 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTCAGGGGTGGC 520272539 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 520272540 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 520272599 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| | ||||| Sbjct 520272600 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 520272659 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 520272660 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 520272719 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| |||||| | || || ||| Sbjct 520272720 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTTAGGGGTGGC 520272767 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | || ||||| ||||| ||| | || || || ||| Sbjct 204602194 ATGCAGATATTTGTGAAGACCTTGACTGGCAAGACCATTACCCTTGAAGTAGAACCCAGT 204602135 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 204602134 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 204602075 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || |||||||| || | || ||||| ||||||||| Sbjct 204602074 CAGAGACTGATCTTTGCTGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 204602015 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||| | || ||||| ||||| ||||| ||||| || || Sbjct 204602014 ATCCAAAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 204601968 Score = 114 bits (126), Expect = 1e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || ||||||||| | || || ||| ||| Sbjct 253694586 ATGCAGATCTTTGTGAAGACCCTGACAGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 253694527 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || ||| ||||||| Sbjct 253694526 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATCCCC-CCGACCAG 253694468 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || | ||| |||||||| || | | |||||| ||||||||| Sbjct 253694467 CAGAGGCTCATATTTGCAGTCAAGCAGCTGGAAGATGGCCACACCCTGTCTGACTACAAC 253694408 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| |||| ||| || | || || ||| Sbjct 253694407 ATCCAGAAAGAACCCACCCTCCATCTGGTCCTGTGTCTTAGGGGTGGC 253694360 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38279 CATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGA 38338 ||||||| | || || || ||| |||| | | | | | || | ||| |||| || Sbjct 230791124 CATCACCCTTGAAGTAGAACCCAGTGACACCATTGAGAATGTCAAGGCAAAGATCCAGGA 230791065 Query 38339 CAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGA 38398 |||||| || || || || ||||| ||| | || || | || || || |||||||| || Sbjct 230791064 CAAAGAAGGCATCCCTGCAGACCAGCAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGA 230791005 Query 38399 CGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | || ||||| |||||||||||||||| ||| | | ||||| ||||| ||||| Sbjct 230791004 TGGTCGTACCCTGTCTAACTACAACATCCAAAAAGAATCTATCCTGCACTTGGTCCTGCG 230790945 Query 38459 TTTGAGAGGCGG 38470 || || || || Sbjct 230790944 CTTTAGGGGAGG 230790933 >seq3 Length=527952102 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || ||||| ||||||||| | || || || ||| Sbjct 475401055 ATGCAGATATTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTAGAACCCAGT 475401114 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| |||| |||||||| || || || | ||||| Sbjct 475401115 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCAGACCAG 475401174 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || |||||||| || | || ||||| ||||||||| Sbjct 475401175 CAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475401234 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||| | || ||||| ||||| ||||| ||||| || || Sbjct 475401235 ATCCAAAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 475401281 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| ||||||||| | || || ||| ||| Sbjct 475400827 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 475400886 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 475400887 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400946 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || |||||||| || | || ||||| ||||||||| Sbjct 475400947 CAGAGACTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475401006 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || ||||| ||||| || ||| | ||||| || Sbjct 475401007 ATCCAGAAAGAATCCACCCTGCACTTGGTCCTTCGTCTCAGAGGTGG 475401053 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 475399915 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAGT 475399974 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 475399975 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400034 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || ||||| || || | || ||||| ||||||||| Sbjct 475400035 CAGAGACTGATCTTTGCCGGGAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAAC 475400094 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || ||||| ||||| || ||| | || || || Sbjct 475400095 ATCCAGAAAGAATCCACCCTGCACTTGGTCCTTCGTCTCAGGGGTGG 475400141 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||| ||| | || || ||| ||| Sbjct 475400143 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAAGTGGAGCCCAGT 475400202 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 475400203 GATACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCCCCAGACCAG 475400262 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || |||||||| || | || ||||| ||||||||| Sbjct 475400263 CAGAGACTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 475400322 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || |||| ||||| || ||| | ||||| || Sbjct 475400323 ATCCAGAAAGAATCCACCTTGCACTTGGTCCTTCGTCTCAGAGGTGG 475400369 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| ||||| ||| | || || || ||| Sbjct 475400371 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATTACCCTTGAAGTAGAACCCAGT 475400430 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 475400431 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 475400490 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || ||||| || || | |||||||| ||||||||| Sbjct 475400491 CAGAGACTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 475400550 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || || || || || ||| | || || ||| Sbjct 475400551 ATCCAGAAAGAATCAACTCTTCACTTAGTCCTTCGTCTCAGGGGTGGC 475400598 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || |||||||||||| | || || || ||| Sbjct 475400599 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAAACCATCACCCTTGAAGTAGAACCCAGT 475400658 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| |||| |||||||| || || ||| | ||||| Sbjct 475400659 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 475400718 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | || || || ||||| || || | || ||||| ||||||||| Sbjct 475400719 CAGAGACTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTCGTACCCTGTCTGACTACAAC 475400778 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || |||| ||||| || ||| | || || ||| Sbjct 475400779 ATCCAGAAAGAATCCACCTTGCACTTGGTCCTTCGTCTCAGGGGTGGC 475400826 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || | || ||||| ||||||||| | || || ||| ||| Sbjct 475399686 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAG 475399745 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | | | || | ||||||| ||||| || || |||||| | ||||| Sbjct 475399746 TGATACCATTGAGAATGTCAAGGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 475399805 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || || || ||||| || || | ||| ||| | |||||||| Sbjct 475399806 GCAGAGATTGATCTTTGCCGGGAAGCAGCTAGAAGATGGGCGAACCTTGTCTGACTACAA 475399865 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || ||| | || |||| ||||| || ||| | || || ||| Sbjct 475399866 CATCCAGAAAGAATCCACCTTGCACTTGGTCCTTCGTCTCAGGGGTGGC 475399914 >seq7 Length=260857928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| | |||| | || || ||| ||| Sbjct 53450296 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGATTGCCACCCTGGAGGTGGAGCCCAGT 53450237 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| ||| | | ||||| Sbjct 53450236 GACACTATTGAGAATGTAAAGGCCAAAATCCAAGACAAAGAGGGCATTGCACCTGACCAG 53450177 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | | ||||| |||||||| || | ||||||| ||||||||| Sbjct 53450176 CAGAGGCTCATCTTTTCAGGCAAGCAGCTGGAAGATGGCTGCACCCTGTCTGACTACAAC 53450117 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || || || ||| | || || | | |||| ||| || | || || ||| Sbjct 53450116 ATTCAGAAAGAATCTACCCTCCCTCTGGTCCTGAGTGTTAGGGGTGGC 53450069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500141439165440