Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 3e-14 >seq3 Length=527952102 Score = 95.1 bits (104), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 131857 AAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTAT 131916 |||| | || ||||||||| ||| ||||| || ||||| || ||| |||| |||||| Sbjct 368168991 AAGAGTGGTTGCTTTTGCTGCTGTGGAAGGGATTTTCTTCTCGGGTTCTTTTGCTGCTAT 368168932 Query 131917 CTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATC-- 131974 || |||||||| ||| | || | |||||||||||| | || |||||| || ||||| Sbjct 368168931 ATTCTGGCTTAAAAAGAGAGGTCTTATGCCTGGACTCACTTTCTCCAATGAACTCATCAG 368168872 Query 131975 TCGAGA 131980 |||||| Sbjct 368168871 TCGAGA 368168866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186736526508376