Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6 473 2e-128 seq2 437 1e-117 seq4 113 6e-20 seq1 111 2e-19 seq8 96.9 5e-15 seq3 84.2 3e-11 >seq6 Length=292091736 Score = 473 bits (524), Expect = 2e-128 Identities = 671/935 (72%), Gaps = 19/935 (2%) Strand=Plus/Minus Query 47796 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 47852 || ||||| |||| || | |||| ||| || | || ||||| ||||||||| | Sbjct 153786798 TAGAAGTCTGCATCCAAGGTAAAAGAATTTTCAGTTGGACTTGACATCACTCCCATTCTC 153786739 Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 |||||||| || || | |||||||| || |||||||| |||||||| || |||| || Sbjct 153786738 TGATATTCTCCTACTCTCTTCTCGAAGAAGTTAGTTTTCCCTTCCAAAGAGATAT---CC 153786682 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 47972 |||||||||||| |||| |||| || |||| || |||| ||| ||| | || ||| Sbjct 153786681 ATAAAATCAAATAGATTTTCTGCTCTAAAAATCTTGCTAAAAGCTAGTTCCAACATAAGT 153786622 Query 47973 CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 48032 || ||||| || ||||| |||||| ||||| | ||||||||||| || | || Sbjct 153786621 CTGTCTGCTACAAATTCGATATATTGCTTCATTAAAGTGCAATTCATTCCAATCAACTTT 153786562 Query 48033 ACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGAT 48092 || || | ||| || || | |||||| ||||| || | ||||||| || || || | Sbjct 153786561 ACAGGCAAAGCTTCAGTCAAAAACTCCTGTTCTATTCTAACAGCATTGACGATCATTTCT 153786502 Query 48093 GTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAAAAT 48150 | || ||||||| || || ||| || ||||| |||||||| || ||||||| Sbjct 153786501 TTCACTTTTTCCTCTGAAGGCTTGTGTAC--CAGGTGTTTGAACATTAAGCAGGCAAAAT 153786444 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 ||||||| | ||| |||||||| ||||| ||||| || ||||| || | || ||||||| Sbjct 153786443 CACAATGTAAACCCTCATCTCTGCTAATAAATTCATTTGAAAAAGTTAATCCAGGCATTA 153786384 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 || ||||| ||| |||| ||||| | || ||||| ||||||||||| || ||||| | Sbjct 153786383 AACCTCGTTTCTTGGGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAA 153786324 Query 48271 CGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTT 48327 | || ||||| || | || | || || || | ||||| |||| ||||| | Sbjct 153786323 CTGCTGCAAAAGCTGCAACACGTTCACCATATGTTGCTTCTTTGTCCCCAATCCATCAAG 153786264 Query 48328 GTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 48387 | |||| ||||| ||||| || |||||||| | |||||| || ||||| |||||||| | Sbjct 153786263 G--CCCAGTCAGCTTTCTTTTTAACACAAGGTAGTGTTTCAATGGCATTGAAGAGAAATT 153786206 Query 48388 ttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAA 48447 |||| || || |||| || || || || | ||||||||||||||| || || Sbjct 153786205 CCCTTTCTTTAGGGTCCTTAA--TATGTGTCAATAAGAAGACTATACATTTCAGAATGTC 153786148 Query 48448 TATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCG 48507 ||||| | ||||| || || || || || || || | |||||||| | |||||| || Sbjct 153786147 TATTTCCCATTGCAATTTGGAAGCCATAGAAGCAGCGGGCTTCTGTTACCTGTACTTCTT 153786088 Query 48508 TACAAAATCG-TTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 | ||| || |||| |||| || ||||||||||| |||||||| || ||||| || || Sbjct 153786087 GGCTAAACCGCTTCAACCAATTT-TCATTTACTATGCCATCACTTGCTGCAAAGAACCCT 153786029 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626 || || || || || || || |||| || ||| | | ||||| | ||||| Sbjct 153786028 AACACGTGAGATATGAAGTACTTCTCGTCAGACTTCAAAGTTTCCCAGTGCTGAATATCC 153785969 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | ||| || || ||||||||||| || || ||||||||||| |||||||| | Sbjct 153785968 TTAGAAAGATCCACCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCTTTCTTATACATGTGT 153785909 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || || ||| ||| | || ||||| || ||||| Sbjct 153785908 CAAATGTCATGGTACTCAATGGGGAAGATGACAAA 153785874 >seq2 Length=541556283 Score = 437 bits (484), Expect = 1e-117 Identities = 667/946 (71%), Gaps = 8/946 (1%) Strand=Plus/Minus Query 47796 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 47852 || ||||| |||| || | |||| ||| || | || ||||| ||||||||| | Sbjct 435771160 TAGAAGTCTCCATCCAAGGTAAAAGAATTCTCAGTTGGACTTGACATCACTCCCATTCTC 435771101 Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 |||||||| || || | |||||||| || |||||||| |||||||| || ||||| ||| Sbjct 435771100 TGATATTCTCCTACTCTGTTCTCGAAGAAGTTAGTTTTCCCTTCCAAAGAGATATTCTCC 435771041 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 47972 ||||||||||||||||| |||| || |||| || |||| |||| ||| | || ||| Sbjct 435771040 ATAAAATCAAATGGATTTTCTGCTCTAAAAATCTTGCTAAAACCTAGTTCCAACATAAGT 435770981 Query 47973 CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 48032 || ||||| || ||||| || ||| ||||| | ||||||||||| || | ||| Sbjct 435770980 CTGTCTGCTACAAATTCAATGTATTGCTTCATTAAAGTGCAATTCATTCCAATCAATTTT 435770921 Query 48033 ACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGAT 48092 | | | || || || | ||||| ||||| || | |||||| || || || | Sbjct 435770920 ATATGCAAAGGTTCAGTCAAGAACTCCTGTTCTATTCTAACAGCACTGACGATAATTTCT 435770861 Query 48093 GTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC-AAAATC 48151 | || ||||||| || | | || ||||| |||||||| || || |||||| Sbjct 435770860 TTCACTTTTTCCTCTGAAGGCTTGTGAACCAGGTGTTTGAACATTAAGCAGGCAAAAATC 435770801 Query 48152 ACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAG 48211 |||||| | | | |||||||| ||||| | ||| || ||||| || | || ||||||| Sbjct 435770800 ACAATGTAAATCCTCATCTCTGCTAATAAGTTCATTTGAAAAAGTTAATCCAGGCATTAA 435770741 Query 48212 TCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 48271 || ||||| |||||||| ||||| | || ||||| ||||||||||| || ||||| || Sbjct 435770740 ACCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAAC 435770681 Query 48272 GGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTG 48328 || ||||| || || || || || | ||||| |||| ||||| | | Sbjct 435770680 TGCTGCAAAAGCTACAACATGTTCACCATATGTTGCTTCTTTGTCCCCAATCCATCATAA 435770621 Query 48329 TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtt 48388 ||||| ||||| ||||| || |||||||| | |||||| || ||||| |||||||| | Sbjct 435770620 GGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGTGTTTCAATGGCATTGAAGAGAAATTC 435770561 Query 48389 tttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAAT 48448 |||| || || |||| ||||| || || | |||| |||||||||| || || || Sbjct 435770560 CCTTTCTTTAGGGTCCTTAATATAAGTGTCAATAAGAAGATTATACATTTCAGAATGTAT 435770501 Query 48449 ATTTTCAATTGCCATCTGAAATCCGTAAAAACATC-TCGCTTCTGTGATCTGTACCTCCG 48507 | || ||| | || || || || || || || | |||||||| | || ||| || Sbjct 435770500 GCTCTCCATTCCAATTTGGAAGCCATAGAAGCAGCGGGGCTTCTGTTACCTATACTTCTT 435770441 Query 48508 TACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTA 48567 | ||| || || ||||||| ||||||| ||| |||||||| || ||||| || |||| Sbjct 435770440 GGCTAAACCGCTCCACCAAATTTTCATTTATTATGCCATCACTTGCTGCAAAGAAAGCTA 435770381 Query 48568 ATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTT 48627 | ||||| || || || || || | || ||| | ||||| | ||||| | Sbjct 435770380 ACACATGAGATATGAAGTACTTCTCCTCAGACTTCAAAGCTTCCCAGTGCTGCATATCCT 435770321 Query 48628 TTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCC 48687 | || | ||| || || ||||||||||| || || |||| || ||| |||||||| | || Sbjct 435770320 TAGAAAGATCCACCTCCTCAGCTGTCCAGAAGGAGGCCTATGATTTCTTATACATGTGCC 435770261 Query 48688 ATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATT 48733 | || ||| ||| | || ||||| || ||||| | || ||||| Sbjct 435770260 AAATGTCATGGTACTCAATGGGGAAGATGACAAAGCGCTTGGGATT 435770215 >seq4 Length=435153693 Score = 113 bits (124), Expect = 6e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 78739 CATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTA 78798 || |||| || | ||| |||||||| || || | |||||| ||||| || || || |||| Sbjct 349039785 CACCACTGAACACTTTCTTTGTTTCTTTATGCAAATTAGAAACAGCAATCCTGGCTGCTA 349039726 Query 78799 GAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATAT 78858 || |||||||| || || | || || | || || ||| |||| || || || | | Sbjct 349039725 AGATGGCATAATCTGGGTGCTTGGTGGTCAAGGTTGCAGCTGTTTCAGCAGCCAAGGTGT 349039666 Query 78859 CTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGATTT 78915 |||| || | || || |||||| | |||| |||||| ||||||||||||| ||||| Sbjct 349039665 CTAATTCCACTGTGGTCACCCCACTGTATAATCCTTGGATAACTTTCATGGTGATTT 349039609 Score = 107 bits (118), Expect = 3e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCC-TTCTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 || || | |||||||||||| || || | || ||| || | ||||| || |||||||| Sbjct 349054302 GAGCCTTCATATGTTTCATAGGGGCCATACTCTTT-GGCCAACTCACAGCTGGCTTCCAA 349054244 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||||| |||||||| ||||| || |||| ||||| || || || ||| ||| || Sbjct 349054243 GGCTCCATAATAAATAGTTTCAAAGATCTGTTTATTCAGTAACTGGGCCTCAGGACTCTC 349054184 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| ||||| | || ||||| ||||| || | ||||| |||||||| ||||| || Sbjct 349054183 AAAAGGATATCTCATCAGGATAAATGCATCAGCCAGACCCTGCACTCCAATTCCAATGGG 349054124 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 349054123 GCGATGGCGTTTATTTGA 349054106 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| |||||||| || |||||| ||| | || || || ||||| || | Sbjct 349067364 TCCAACCATAGAAGTGCATGCTGGTGAGTTTGCCATAGTTGGGCTCAGCAATATGGATGT 349067305 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| |||||||| ||||| ||||| || ||||||||||| ||||| || | || || | Sbjct 349067304 TCAAAGACTGACTCTGATCAATGAATGCCCCTCTATCAGCTGCCATCTTGAGAACAGTTT 349067245 Query 76969 TTTGAGGAATTTCCCAAATAGTTTT 76993 | || | |||||||| | ||| || Sbjct 349067244 TCTGTGAGATTTCCCACACAGTCTT 349067220 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || ||||||||||| | || || || ||||| ||||||||| | || || || || || Sbjct 349043612 GTGCCTGCATTAAAAAGGGTGGGGGAGGCATGAGTAAACCATCTCTCTGAGAGAAGGTTA 349043553 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || ||||||||||| | || ||||| || ||||| || || | || | ||| | | Sbjct 349043552 TAGGTTTCAATAGCAGCATCAATGTCATCTTTGTGAATCCCCACAGACACTCTCATTAGC 349043493 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 || |||||||||| |||| || Sbjct 349043492 ATGTGCTGAGGTCGTTCAGCC 349043472 >seq1 Length=748055161 Score = 111 bits (122), Expect = 2e-19 Identities = 107/137 (78%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 47796 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 47852 || ||||| |||| || | |||| ||| || | || ||||| ||||||||| | Sbjct 529233514 TAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGTTGGACTTGACATCACTCCCATTCTC 529233573 Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 |||||||| || || | |||||||| || |||||||| |||||||| || ||||| ||| Sbjct 529233574 TGATATTCTCCTACTCTCTTCTCGAAGAAGTTAGTTTTTCCTTCCAAAGAGATATTCTCC 529233633 Query 47913 ATAAAATCAAATGGATT 47929 ||||||||||||||||| Sbjct 529233634 ATAAAATCAAATGGATT 529233650 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||| || | || ||||||| || ||||| ||| Sbjct 529237635 TCATCTCTGCTAATAAGTTCATTTGAAAAAGTTAATCCAGGCATTAAACCTCGTTTCTTG 529237694 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 529237695 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAAGC 529237753 Score = 84.2 bits (92), Expect = 3e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 95782 GTGATAGGTATAGATGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATG 95841 || || ||||| ||||||||||| || || || ||||| |||||||| |||| |||| Sbjct 329235972 GTCATTGGTATTGATGAGGGACAGTTTTTCCCAGACATTGTAGAATTCAGTGAGACCATG 329236031 Query 95842 GCAAACAATGGAAAAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCG 95901 ||||| ||| || | | | || || || ||| ||||||| || ||||| | ||| | Sbjct 329236032 GCAAATGCTGGGAAGACAATAATTGTAGCTGCACTAGATGGGACCTTTCAGAGGAAGGCA 329236091 Query 95902 TTTACGACTATTTCGAATCTT-ATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGT 95960 || || || | | || ||| || || | | || | | || ||||||| |||||| Sbjct 329236092 TTGGGGAATA-TCCTAAACTTGATGCCACTGACAGAGAGTATGGTGAAACTGATAGCAGT 329236150 Query 95961 ATGTATGAAGTGTTT 95975 || ||| |||| || Sbjct 329236151 GTGCATGGAGTGCTT 329236165 >seq8 Length=312544902 Score = 96.9 bits (106), Expect = 5e-15 Identities = 237/355 (67%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 45877 CCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTTC 45936 ||||| || ||||| ||| | | | |||||| |||||| ||| ||||| | Sbjct 120114871 CCAGTAGAACCAAAACCTCCCGATCCACGTTCAGTGTCATCTAAGCCTTGGACTTCTTCA 120114812 Query 45937 AGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTATT 45996 || || |||||| | | | || | | || || || || || | |||||| | |||| | Sbjct 120114811 AGTTCTGGATAAAAAACCCATTCACAAATCAGCTGTGCAATCCGGTCACCCTTTTTTACT 120114752 Query 45997 TCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTTCA 46056 ||||| | ||||| ||| ||| | || | || |||| | |||| ||||||||| Sbjct 120114751 TCAAAGGTTTCTTTGCCAAAATTAAATAGCACTACACCAACATTTCCTCCGTAATCTTCA 120114692 Query 46057 TCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGAGCT 46113 ||||| || || |||| ||||| || |||| || || |||| ||||| Sbjct 120114691 TCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGTAGCCAAGGCAGAATGTGGAGCA 120114632 Query 46114 ATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTCCTT 46173 | || ||||||||| || | || ||| ||||||| ||||| | ||| ||| Sbjct 120114631 ACTCGACCATAACAGCCAGGAGGAAGAGGAATCTGAATATCAGTTTTCA-CAA-GGGCTT 120114574 Query 46174 TCTCCA--GGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 |||||| | || || ||||| || || |||||||| || ||||| || || || Sbjct 120114573 TCTCCATGGCTGGTATTGTATAATCATAGGCACTGTACAAGTCATAGCCAGCAGC 120114519 >seq3 Length=527952102 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| |||||||| ||||| || ||||||| ||| | ||||||||| ||||| || ||| Sbjct 368183641 TACCTCTTCAGCAGTCCAGAAGGATGCCTGTGCCTGTTTATACATCTTCCAGATGTCAGG 368183700 Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723 || || ||||||||||| ||||||| Sbjct 368183701 ATACTGAATTGGGAAAATGACAAATC 368183726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694625244266240