Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000006.1 Length=35100 Score E Sequences producing significant alignments: (Bits) Value seq229759 412 8e-111 >seq229759 Length=864 Score = 412 bits (456), Expect = 8e-111 Identities = 491/666 (74%), Gaps = 20/666 (3%) Strand=Plus/Plus Query 11018 ACGGCCTACGAGCAGACGGTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAACCAT 11077 || || ||||| || |||||||| || || ||||| | | ||| | |||||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCAC 214 Query 11078 GTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTGTGGGAC--- 11134 || | || || | | |||||||| |||| | | |||||||| ||||||||| Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 11135 --CTGGCGGAGGCCATCGTGCAGAACCCGGACAGCAAGCCTCTGACGGCG-CAGCTGTTC 11191 || || | | ||| ||||| | |||||||| || | |||| | |||||| Sbjct 275 GTCTTGCCGCTGGAATC------AACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTC 328 Query 11192 CTGGTGGTACAGCACAGCAGGGACAACGAGGCGTTCAGGGAGGCGCTGCTAAACATCGCC 11251 || | || ||||||| || |||||||||||| |||||||| |||||||||||||| | Sbjct 329 CTTATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTA 388 Query 11252 GAGCCCGAGGGTCGCTGGCTGCTGGAGCTGATCAACATCTTGCAGAGCATCGTAGTTCAG 11311 ||||||||||| ||||||||||| || |||| ||||| |||| ||||| || || ||| Sbjct 389 GAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAG 448 Query 11312 GAGCGCAGCCTGAGCTTGGCCGAGAAGGTGGCGGCAATCAACTACTCGGTGCTTAGCCTG 11371 ||||||| | ||||| |||| || |||| ||| || || ||||| || |||| | ||| Sbjct 449 GAGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTG 508 Query 11372 GGCAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAGGAGGTG 11431 |||||||||||| | ||| ||| ||| | || || ||||| ||| || || | ||||| Sbjct 509 GGCAAGTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTA 567 Query 11432 AAGATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACGCTGAGCGACGACCTG 11491 ||||| || | || ||||||||||||| | | |||||||| || ||| |||||||||| Sbjct 568 AAGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTG 627 Query 11492 GGCGTGTACCGCAACGACCGCATCCACAAGGCCGTGAGCGCGAGCCGGCGGCGCGAGCTG 11551 |||| || |||||||| ||||||||||| |||||||||| |||||||||||||||||| Sbjct 628 AGCGTTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 687 Query 11552 AGCGACCGCGAGCTGATGCTGAGCCTGCGCCGGGCGCTGGTAGG---GGGCNNNNNNNNN 11608 ||||||||||||||||||| ||||||| |||| |||| || |||| Sbjct 688 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGAT 747 Query 11609 NNNNAG---GAGTCYTACTTCGACATGGGGGCGGACCTGCATTGGCAGCCGAGCCGGCGC 11665 || ||||| ||||| ||| ||| || ||||||| ||| || ||||| ||| Sbjct 748 AGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGC 807 Query 11666 GCCTTG 11671 ||| || Sbjct 808 GCCCTG 813 Lambda K H 0.634 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111828390082884