Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq229759 1002 0.0 seq255701 203 7e-48 seq275059 113 1e-20 >seq229759 Length=864 Score = 1002 bits (1110), Expect = 0.0 Identities = 654/713 (92%), Gaps = 5/713 (1%) Strand=Plus/Plus Query 11520 AACCGCATACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCA 11579 |||||| ||||| || ||||||||||| |||||||||||| | ||||| |||||| Sbjct 155 AACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCA 213 Query 11580 CGTGCGTACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTT 11639 | || | || ||||||| |||||||| |||||||| |||||||||||||||||||||| Sbjct 214 CCTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTT 273 Query 11640 TGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCG-CAGCTGTTCCTTA 11698 ||| ||||||| || ||||||||||||||||||||||||| | |||||||||| Sbjct 274 TGTCTTGCCGCTGGAATCAA-CCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTA 332 Query 11699 TAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 11758 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 333 TAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 392 Query 11759 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATCCTGCAGAGCATAGTGGTGCAGGAGC 11818 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 393 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGC 452 Query 11819 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATCAACTATTCCATGCTTAGCCTGGGCA 11878 ||| |||||||||||||||||||| ||||||||| |||||||||||||| | ||||||| Sbjct 453 GCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCA 512 Query 11879 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGA 11938 |||||||| ||||| ||||||||||||||||||||||||| || || | |||||||||| Sbjct 513 AGTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGA 571 Query 11939 TCGAGGGGTTCTACATGCGCATGGCGCTGAAGGTGCTTACCTTGAGCGACGACCTGGGCG 11998 |||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||| Sbjct 572 TCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCG 631 Query 11999 TTTATCGCAACGAGCGCATCCACAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCG 12058 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 632 TTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCG 691 Query 12059 ACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATAGAG 12118 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 692 ACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAG 751 Query 12119 AGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCC 12178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 AGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCC 811 Query 12179 TG-GAGGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACCCGCGCGCGCTGG 12230 || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 812 TGTAAGGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACTCGCGCGCGCTGG 864 >seq255701 Length=784 Score = 203 bits (224), Expect = 7e-48 Identities = 349/484 (72%), Gaps = 22/484 (5%) Strand=Plus/Plus Query 11672 AGCCGCTCATGGCGCAGCTGTTCCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCA 11731 ||||||||||||||||| |||||||||| ||| || || ||||||| |||||||| Sbjct 306 AGCCGCTCATGGCGCAGA-GTTCCTTATATTGCCGCTGGACAAGGACAACCCGGCATTCA 364 Query 11732 GGGATGCGCTGCTAAACATAGTAGAGCCCGAGGGCCGCTG-GCTGCTCGATTTGATAAAC 11790 || |||||||||| | | || || | |||||| ||||||| |||||| |||| Sbjct 365 GGCATGCGCTGCTGACACTGCTACAGGTGCTGCCCCGCTGTGCTGCTCCATTTGA-AAAC 423 Query 11791 ATCCTGCAGAGCATAGTGG-TGCAGGA---GCGCAGCTTGAGCCTGG-CTGACAAGGTGG 11845 || |||| ||||||| | ||| || || || ||||| |||| |||| ||||| Sbjct 424 ATTCTGCTAAGCATAGAGTCTGCGTGACTTGCACA-CTTGACCCTGCACTGAATGGGTGG 482 Query 11846 CCGCCATCAACTATTCCATGCTTAGC-CTGGG-CAAGTTTTACGCCC-GCAAGATATACC 11902 ||||||| ||||||| ||||| | | |||| ||| | |||| || ||||| Sbjct 483 CCGCCATTAACTATTGCATGCATGTCTCTGGAACAAATGATACGTGGAGCCTGATATTGG 542 Query 11903 ATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCGAGGGGTTCTACATGCGCATGG 11962 ||||||||||| |||| || ||| |||||| |||| ||| | || ||| ||||| Sbjct 543 ATACCCCTTACCTTCCGCTACACATCGAGGTAGTGATCCCGGGACTGGACGTGCACATGG 602 Query 11963 CGCTGAAGGTGCTTACCTTGAGCGACGAC-CTGGGCGTTTATC-GCAACGAGCGCATCCA 12020 | || || ||||||||| ||||||| |||| | |||| || | || ||||| Sbjct 603 TGTACAATCTGATTACCTTGACCGACGACACTGGTATTGTATCTGC--CCAGAGCATCTG 660 Query 12021 CAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACCG-CGAGCTGATGCACA-GC 12078 || | |||| || | | || ||||||||||| ||| |||||||||||||| || Sbjct 661 CAGACACATGAGTCTGCGGCTGCCTCGCGAGCTCAGATGCCGCCGAGCTGATGCACACGC 720 Query 12079 CTGCA-AAGGGCCCTGGCTGG--CACGGGCAGCGGCGATAGAGAGGCCGAGT-CCTACTT 12134 ||||| | | || |||||| | |||||||| |||||||| | ||||||| | ||||| Sbjct 721 CTGCAGACGCGCTCTGGCTCGTCTACGGGCAGGTGCGATAGACACGCCGAGTGCTTACTT 780 Query 12135 TGAC 12138 |||| Sbjct 781 TGAC 784 Score = 98.7 bits (108), Expect = 2e-16 Identities = 213/315 (68%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 16685 CTTGACGACGAGGTGGAACTGCTGCACGCTACCGCGCCCAGGCGACGGGTACAGTGGAAA 16744 |||| ||| | |||||||||||||| | ||| ||| | || || | || Sbjct 92 CTTGCCGAATATGTGGAACTGCTGCAAACCCCCGATCCCGCCCTCCGCCTAGATCGGTGC 151 Query 16745 GGTCGACGCGTAAAACGTGTTTTGCGACCCGGCACCACCGTAGTCTTTACGCCCGGTGAG 16804 |||| ||||||| || || ||||| |||||| | | ||| | ||||||| |||| Sbjct 152 GGTCAACGCGTACGACCTGATTTGCAACCCGGAAACTACGTTTTTTTTACGCTTTGTGAC 211 Query 16805 CGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTT 16864 |||||||||||||| | | |||||| ||||| |||| |||||||||||||| Sbjct 212 CGCTCCACCCGCACTTGTGGCCCCGTGTAAGATGACTAGTACACTGACGAGGACCTGCTA 271 Query 16865 GAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTA-CGGAAAGCGGCATAAGGACATGCT 16923 ||||||| | ||||||||||||||||| | | ||| | || | || Sbjct 272 CTTTGTGCCAACGCTGGACTCGGGGAGTTTGCCTAGCCGCTCATGGCGCA--GAGTTCCT 329 Query 16924 GGCGTTGCCGCTGGACGAGGGCAACCCAACACCTAGCCTAAAGCCCGTAACACTGCAGCA 16983 |||||||||||| ||| |||||| || || | || | ||||||| || Sbjct 330 TATATTGCCGCTGGACAAGGACAACCCGGCATTCAGGCATGCGCTGCTGACACTGCTACA 389 Query 16984 GGTGCTGCCCGCGCT 16998 |||||||||| |||| Sbjct 390 GGTGCTGCCC-CGCT 403 >seq275059 Length=376 Score = 113 bits (124), Expect = 1e-20 Identities = 179/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 18286 CCAACCAGGCAGTGCAAAATAAGATTAACAGTAAGCTTGATCCCCGCCCTCCCGTAGAGG 18345 ||| ||||||||| |||| ||||||| ||||||| | || | ||| | || | |||| Sbjct 360 CCATCCAGGCAGTTCAAATTAAGATTGGCAGTAAGTTGTATAGCGGCCATGCCATCGAGG 301 Query 18346 AGCCTCCACCGGCCGTGGAGACAGTGTCTCCAGAGGGGCGTGGCGAAAAGCGTCCGCGCC 18405 || ||||| | |||||| || ||||||||||||| | || |||||| | | Sbjct 300 CGCTTCCACGGTTTGTGGAGGCAAAGTCTCCAGAGGGGTGGGGGGAAAAGTCTAGCAGGT 241 Query 18406 CCGACAGGGAAGAAACTCTGGTGACGC-AAATAGACGAGCCTCCCTCGTACGAGGAGGCA 18464 || |||||||||| ||| | || | | ||||||| |||| || | | | ||| || | Sbjct 240 CCTACAGGGAAGACACT-TCGTCATACCAAATAGATGAGCTTCGGTTGGAGGAGTAGCCG 182 Query 18465 CTAAAGCAAGGCCTGCCCACCACCCGTCCCATCGCGCCCATGGCTACCGGAGTGCTGGGC 18524 |||| ||||| ||||| |||| ||| ||| || | ||||| | ||| || | Sbjct 181 GTAAAACAAGGTATGCCCGCCACGGGTCGCATAGCACGTATGGCGAGTGGACCTTTGCAC 122 Query 18525 CAGCACACACCCGT 18538 |||||||||| ||| Sbjct 121 CAGCACACACGCGT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114501146653800