Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq229759 345 1e-90 >seq229759 Length=864 Score = 345 bits (382), Expect = 1e-90 Identities = 493/686 (72%), Gaps = 25/686 (4%) Strand=Plus/Plus Query 11273 ACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAACCAC 11332 || |||||||| || || ||||| | ||| ||||| | | || || | ||||||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCAC 214 Query 11333 GTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGACCTG 11392 || | || || | | |||||||| || | | | |||||||| ||||||||| | Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 11393 --CTGGAGGCCATCGTGCAG--AACCCCACCAGCAAGCCGCTGACGGCG-CAGCTGTTCC 11447 || | || || | ||||| | ||||||||||| | |||| | ||||||| Sbjct 275 GTCTTGCCGC-----TGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCC 329 Query 11448 TGGTGGTGCAGCATAGTCGGGACAACGAAGCGTTCAGGGAGGCGCTGCTGAATATCACCG 11507 | | |||||||| | ||||||||| || |||||||| |||||||| || || | Sbjct 330 TTATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 389 Query 11508 AGCCCGAGGGCCGCTGGCTCCTGGACCTGGTGAACATTCTGCAGAGCATCGTGGTGCAGG 11567 ||||||||||||||||||| || || || | ||||||||||| ||||| |||||||||| Sbjct 390 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGG 449 Query 11568 AGCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTCTCGGTGCTGAGTTTGG 11627 ||||| || ||| | || ||| ||| ||||| |||| || |||| | | ||| Sbjct 450 AGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGG 509 Query 11628 GCAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGA 11687 |||||| ||| | | ||| ||| | ||||| ||||| ||| || || | ||||| | Sbjct 510 GCAAGTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAA 568 Query 11688 AGATCGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGG 11747 ||||||| ||||| |||||||||||| |||| ||||| ||| ||| |||||| ||| Sbjct 569 AGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGA 628 Query 11748 GGGTGTACCGCAACGACAGGATGCACCGTGCGGTGAGCGCCAGCAGGCGGCGCGAGCTGA 11807 | || || |||||||| | || ||| || ||||||| ||| ||||||||||||| | Sbjct 629 GCGTTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 688 Query 11808 GCGACCAGGAGCTGATGCATAGTCTGCAGCGGGCCCTGACCG----GGGCCGGGAC---- 11859 |||||| ||||||||||| || ||||| |||||||| | | |||| | ||| Sbjct 689 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATA 748 Query 11860 -CGAGGGGGAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGG 11918 |||| ||| |||||||||| |||||| ||||||| |||| || ||||| || | Sbjct 749 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCG 808 Query 11919 CCTTG-GAGGCGGC---GGCAGGACC 11940 || || |||| || ||| ||||| Sbjct 809 CCCTGTAAGGCAGCTGGGGCCGGACC 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116354215350342