Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq229759 1002 0.0 seq255701 199 9e-47 seq275059 105 2e-18 >seq229759 Length=864 Score = 1002 bits (1110), Expect = 0.0 Identities = 654/713 (92%), Gaps = 5/713 (1%) Strand=Plus/Plus Query 11529 AACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCA 11588 |||||||||||| || ||||||||||| |||||||||||| | ||||| |||||| Sbjct 155 AACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCA 213 Query 11589 CGTGCGCACGCTTGTAGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTT 11648 | || | || ||||| | |||||||| |||||||| |||||||||||||||||||||| Sbjct 214 CCTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTT 273 Query 11649 TGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGT-TGTTTCTTA 11707 ||| ||||||| || ||||||||||||||||||||||||| | |||| |||| Sbjct 274 TGTCTTGCCGCTGGAATCAA-CCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTA 332 Query 11708 TAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGTTAAACATAGTAGAGC 11767 |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 333 TAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 392 Query 11768 CCGAGGGCCGCTGGCTGCTCGATTTGATAAATATTCTGCAGAGCATAGTGGTGCAGGAGC 11827 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 393 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGC 452 Query 11828 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 11887 ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 453 GCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCA 512 Query 11888 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGA 11947 |||||||| ||||| ||||||||||||||||||||||||| || || | |||||||||| Sbjct 513 AGTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGA 571 Query 11948 TCGAGGGGTTCTACATGCGCATGGCGCTGAAGGTGCTTACCTTGAGCGACGACCTGGGCG 12007 |||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||| Sbjct 572 TCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCG 631 Query 12008 TTTATCGCAACGAGCGCATCCACAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCG 12067 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 632 TTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCG 691 Query 12068 ACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATAGAG 12127 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 692 ACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAG 751 Query 12128 AGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCC 12187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 AGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCC 811 Query 12188 TG-GAGGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACCCGCGCGCGCTGG 12239 || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 812 TGTAAGGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACTCGCGCGCGCTGG 864 >seq255701 Length=784 Score = 199 bits (220), Expect = 9e-47 Identities = 348/484 (72%), Gaps = 22/484 (5%) Strand=Plus/Plus Query 11681 AGCCGCTCATGGCGCAGTTGTTTCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCA 11740 ||||||||||||||||| ||| |||||| ||| || || ||||||| |||||||| Sbjct 306 AGCCGCTCATGGCGCAGA-GTTCCTTATATTGCCGCTGGACAAGGACAACCCGGCATTCA 364 Query 11741 GGGATGCGCTGTTAAACATAGTAGAGCCCGAGGGCCGCTG-GCTGCTCGATTTGATAAAT 11799 || |||||||| | | | || || | |||||| ||||||| |||||| ||| Sbjct 365 GGCATGCGCTGCTGACACTGCTACAGGTGCTGCCCCGCTGTGCTGCTCCATTTGA-AAAC 423 Query 11800 ATTCTGCAGAGCATAGTGG-TGCAGGA---GCGCAGCTTGAGCCTGG-CTGACAAGGTGG 11854 ||||||| ||||||| | ||| || || || ||||| |||| |||| ||||| Sbjct 424 ATTCTGCTAAGCATAGAGTCTGCGTGACTTGCACA-CTTGACCCTGCACTGAATGGGTGG 482 Query 11855 CCGCCATTAACTATTCCATGC-TCAGTCTGGG-CAAGTTTTACGCCC-GCAAGATATACC 11911 ||||||||||||||| ||||| | ||||| ||| | |||| || ||||| Sbjct 483 CCGCCATTAACTATTGCATGCATGTCTCTGGAACAAATGATACGTGGAGCCTGATATTGG 542 Query 11912 ATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGATCGAGGGGTTCTACATGCGCATGG 11971 ||||||||||| |||| || ||| |||||| |||| ||| | || ||| ||||| Sbjct 543 ATACCCCTTACCTTCCGCTACACATCGAGGTAGTGATCCCGGGACTGGACGTGCACATGG 602 Query 11972 CGCTGAAGGTGCTTACCTTGAGCGACGAC-CTGGGCGTTTATC-GCAACGAGCGCATCCA 12029 | || || ||||||||| ||||||| |||| | |||| || | || ||||| Sbjct 603 TGTACAATCTGATTACCTTGACCGACGACACTGGTATTGTATCTGC--CCAGAGCATCTG 660 Query 12030 CAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACCG-CGAGCTGATGCACA-GC 12087 || | |||| || | | || ||||||||||| ||| |||||||||||||| || Sbjct 661 CAGACACATGAGTCTGCGGCTGCCTCGCGAGCTCAGATGCCGCCGAGCTGATGCACACGC 720 Query 12088 CTGCA-AAGGGCCCTGGCTGG--CACGGGCAGCGGCGATAGAGAGGCCGAGT-CCTACTT 12143 ||||| | | || |||||| | |||||||| |||||||| | ||||||| | ||||| Sbjct 721 CTGCAGACGCGCTCTGGCTCGTCTACGGGCAGGTGCGATAGACACGCCGAGTGCTTACTT 780 Query 12144 TGAC 12147 |||| Sbjct 781 TGAC 784 Score = 104 bits (114), Expect = 5e-18 Identities = 178/255 (70%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 16764 GGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACCGTAGTCTTTACGCCCGGTGAG 16823 |||| ||||||| ||| || ||||| |||||| | | ||| | ||||||| |||| Sbjct 152 GGTCAACGCGTACGACCTGATTTGCAACCCGGAAACTACGTTTTTTTTACGCTTTGTGAC 211 Query 16824 CGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTT 16883 |||||||||||||| | | |||||| ||||| |||| |||||||||||||| Sbjct 212 CGCTCCACCCGCACTTGTGGCCCCGTGTAAGATGACTAGTACACTGACGAGGACCTGCTA 271 Query 16884 GAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTA-CGGAAAGCGGCATAAGGACATGCT 16942 ||||||| | ||||||||||||||||| | | ||| | || | || Sbjct 272 CTTTGTGCCAACGCTGGACTCGGGGAGTTTGCCTAGCCGCTCATGGCGCA--GAGTTCCT 329 Query 16943 GGCGTTGCCGCTGGACGAGGGCAACCCAACACCTAGCCTAAAGCCCGTGACACTGCAGCA 17002 |||||||||||| ||| |||||| || || | || ||||||||| || Sbjct 330 TATATTGCCGCTGGACAAGGACAACCCGGCATTCAGGCATGCGCTGCTGACACTGCTACA 389 Query 17003 GGTGCTGCCCGCGCT 17017 |||||||||| |||| Sbjct 390 GGTGCTGCCC-CGCT 403 >seq275059 Length=376 Score = 105 bits (116), Expect = 2e-18 Identities = 177/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 18305 CCAACCAGGCAGTGCAAAATAAGATTAACAGTAAGCTTGATCCCCGCCCTCCCGTAGAGG 18364 ||| ||||||||| |||| ||||||| ||||||| | || | ||| | || | |||| Sbjct 360 CCATCCAGGCAGTTCAAATTAAGATTGGCAGTAAGTTGTATAGCGGCCATGCCATCGAGG 301 Query 18365 AGCCTCCACCGGCCGTGGAGACAGTGTTGCCAGATGGGCGTGGCGAAAAGCGCCCGC-GC 18423 || ||||| | |||||| || || ||||| ||| | || |||||| | || | Sbjct 300 CGCTTCCACGGTTTGTGGAGGCAAAGTCTCCAGAGGGGTGGGGGGAAAAGT-CTAGCAGG 242 Query 18424 CCCGACAGGGAAGAGACTCTGGTGACAC-AAATCGACGAGCCTCCCTCGTACGAGGAGGC 18482 || |||||||||| ||| | || | || |||| || |||| || | | | ||| || | Sbjct 241 TCCTACAGGGAAGACACT-TCGTCATACCAAATAGATGAGCTTCGGTTGGAGGAGTAGCC 183 Query 18483 GCTAAAGCAAGGCCTGCCCACCACCCGTCCCATCGCGCCCATGGCTACCGGAGTGTTGGG 18542 | |||| ||||| ||||| |||| ||| ||| || | ||||| | ||| ||| Sbjct 182 GGTAAAACAAGGTATGCCCGCCACGGGTCGCATAGCACGTATGGCGAGTGGACCTTTGCA 123 Query 18543 CCAGCACACAC 18553 ||||||||||| Sbjct 122 CCAGCACACAC 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114702081813666