Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000020.1 Length=31323 Score E Sequences producing significant alignments: (Bits) Value seq229759 82.4 2e-11 >seq229759 Length=864 Score = 82.4 bits (90), Expect = 2e-11 Identities = 227/344 (66%), Gaps = 7/344 (2%) Strand=Plus/Plus Query 10159 ACGGCCTATGAGCATACTGTGAAGGCAGAGGTTAATTTTCAGACCACCTTTAACAACAAT 10218 || || || || || || ||||| || |||| |||| |||| | |||| |||| | Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTC-TTTACCAACCAC 214 Query 10219 GTGCGTACCCTCATCGCCAGGGAAGAGGTGGTCATTGGCCTGATGCACTTGTGGGACTTT 10278 || | || || | | | || || ||| || | |||||||| ||||||||||| Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 10279 GTGGAGGCCTTTCTAGAA--AACCCAGTGAGCAAGGCCCTCACTGCC-CAGCTCTTTCTT 10335 || | | || ||| |||||| |||||| | |||| || | || || ||| Sbjct 275 GTCTTGCCG---CTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTT 331 Query 10336 ATAGTGCAACACTGCAGGGACGAGGGGGTGCTGCGGGAAAGCTTGCTAAACATTGCCGAG 10395 |||||||| ||| || |||| | | || | |||| |||||||||| | ||| Sbjct 332 ATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 391 Query 10396 CCTGAGAGCCGGTGGCTGGTGGACCTGTTAAACCTGTTACAGACTATTGTGGTGCAAGAG 10455 || ||| |||| |||||| | || || ||||| | | || | || |||||||| ||| Sbjct 392 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAG 451 Query 10456 CGAGGCTTGGCAGTTGGTGAAAAGGTAGCGGCTATAAACTACTC 10499 || |||| | | ||| |||| || || || ||||| || Sbjct 452 CGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTC 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99781848831870