Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq229759 100 6e-17 >seq229759 Length=864 Score = 100 bits (110), Expect = 6e-17 Identities = 206/302 (68%), Gaps = 16/302 (5%) Strand=Plus/Plus Query 11045 CTTCAACAACAACGTGCGCACCCTGGTGAGCCGGGACGAGGTGACCATGGGACTGATGCA 11104 ||| | |||| || || | || || ||| | || || || || | || |||||||||| Sbjct 202 CTTTACCAACCACCTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCA 261 Query 11105 CCTGTGGGACTTTGTGGAGGCCTTCCTGCAG----CACCCCCGGTCCCGCGC-GCTGACC 11159 |||||||||||||| ||| | || | || ||| | | || ||| | Sbjct 262 TCTGTGGGACTTTGT------CTTGCCGCTGGAATCAACCCAAATAGCAAGCCGCTCATG 315 Query 11160 GCG-CAGCTGCTGCTGATCGCGCAGCACTGCCGGGACGAGG--GCATGGTGAAGGAGGCG 11216 ||| | ||| | || || | ||||||| | |||| | | |||| | | ||| ||| Sbjct 316 GCGTCCTCTGTTCCTTATAGTGCAGCACACCACGGACAACGAGGCAT--TCAGGGATGCG 373 Query 11217 CTGCTGAGCCTGGGCGCGCCCGAGAGCCGCTGGCTGGTGGACCTGGTGAACCTGCTCCAG 11276 ||||| | | | | | ||||||| ||||||||||| | || || | ||| | || || Sbjct 374 CTGCTAAACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAT 433 Query 11277 ACCATTGTGGTGCAGGAGCGGTCCATGAGCCTGAGCGAGAAGGTGGCGGCCATCAACTAC 11336 | ||| |||||||||||||| || |||||||| || |||| ||| ||||| ||||| Sbjct 434 AGCATAGTGGTGCAGGAGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTAT 493 Query 11337 TC 11338 || Sbjct 494 TC 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108619806418992