Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq101443 105 1e-17 seq114449 93.3 9e-14 seq113050 91.5 3e-13 seq121990 89.7 1e-12 seq104563 89.7 1e-12 seq47167 89.7 1e-12 seq11010 89.7 1e-12 >seq101443 Length=11716 Score = 105 bits (116), Expect = 1e-17 Identities = 158/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 ||| | |||||| |||||| ||||| ||||| ||||||||||| |||| || | ||| Sbjct 5497 CAAACCTCAACAAGTGAACTTTATGGGAAAGTACAAGAAATTCCACAAAAGGAGAAGACC 5556 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATT-TGTAA 61207 || ||||||||||| || ||||| | ||||||| || |||||||||||| || Sbjct 5557 CCTTTTTATCCTCGGTCACCATATGGAGCCACAAAACTTTATGCTTACTGGATTGTGGTG 5616 Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCG-ATTTGTTTCAATCACGAGA 61266 || || || ||| | || |||||| ||| | | | || ||| ||||| |||| Sbjct 5617 AACTT-CCATGAGGCCTACAACCTGTTTG-CTGTGAATGGTGTTCTTTTTAATCATGAGA 5674 Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTA 61305 |||||| ||||| | | ||||| ||| | ||||||| Sbjct 5675 GTCCCAGAAGAGGGGCTAATTTTGTAACTTGAAAAATTA 5713 >seq114449 Length=23594 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 3160 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 3219 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 3220 GCCCCACGTTGGGC 3233 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 22170 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 22111 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22110 CCCACGTTGGGC 22099 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 22483 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 22424 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22423 CCCACGTTGGGC 22412 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 23429 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 23488 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 23489 CCCACGTTGGGC 23500 >seq113050 Length=32340 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 165701 AAAACGCTT-GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGT 165759 ||||| | | ||||| ||||||||||||||||||| ||||| ||||||| |||||| Sbjct 29499 AAAACTCGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGT 29558 Query 165760 GGGTTCGAGCCCCACGATGGGC 165781 |||||||||||||||| ||||| Sbjct 29559 GGGTTCGAGCCCCACGTTGGGC 29580 >seq121990 Length=8562 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 5795 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5854 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5855 CCCACGTTGGGC 5866 >seq104563 Length=48993 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 35682 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 35623 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 35622 CCCACGTTGGGC 35611 >seq47167 Length=28033 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 4327 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 4268 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4267 CCCACGTTGGGC 4256 >seq11010 Length=69854 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 54052 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 54111 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 54112 CCCACGTTGGGC 54123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1054060080063930