Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq92824 244 1e-59 seq34511 235 6e-57 >seq92824 Length=186084 Score = 244 bits (270), Expect = 1e-59 Identities = 415/598 (69%), Gaps = 10/598 (2%) Strand=Plus/Plus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||| ||||| | ||| || ||||| || || || ||||| ||||| || |||||| Sbjct 146038 AGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGT 146097 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || ||||| || ||||| ||||| ||||||||||| | ||| ||||| | || Sbjct 146098 TCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCA 146157 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 || || ||||||||||| || || || || | ||||| || | | ||||| | || Sbjct 146158 AAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATAT 146217 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCA---CCCACTCGGCTTTTTGCTTTATGCAA 17182 || || ||| ||| | |||||| | ||| |||| || ||||| | || | ||| Sbjct 146218 GTTGCTTCTCTGTCCCCAATCCA---CCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAA 146274 Query 17183 TCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240 || |||||| ||||| || | | || ||||| |||| | |||| | ||||| | Sbjct 146275 GGCAGCGTTTCAATGGCATTGAAGAGAAATTCTC--TTTCTTTGGGGTCCTTAATATAAG 146332 Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGT 17300 | || || || || || |||||||| || |||||||| ||||| || || || || || | Sbjct 146333 TGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCAT 146392 Query 17301 AAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGT 17360 | || || || ||||| | | || ||||| | ||| || ||| | | |||||| | Sbjct 146393 AGAAACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCAT 146452 Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 | || ||||| || || || || || || || || || ||||| ||||| || | Sbjct 146453 TTACTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCT 146512 Query 17421 CCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCC 17480 | || | || ||||| || | ||| || || | |||||| || || | |||| Sbjct 146513 CAGGCTTCAGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCC 146572 Query 17481 AAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | || ||| |||| || |||||||| | |||||| |||| ||| || |||||||| Sbjct 146573 AGAAGGAGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAA 146630 >seq34511 Length=68903 Score = 235 bits (260), Expect = 6e-57 Identities = 588/885 (66%), Gaps = 15/885 (2%) Strand=Plus/Plus Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723 || ||| |||| || || || | || | || || || ||||| ||||| || || Sbjct 59438 ACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGAT 59497 Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGT 16783 || ||||| ||||| |||||||| ||||| ||| || || || | || ||| Sbjct 59498 GAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGT 59557 Query 16784 TCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATT 16843 || || | ||| || ||||||||||| || || || |||||| ||| |||||| Sbjct 59558 TCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATT 59617 Query 16844 CCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCC 16903 || || | ||| || | |||||| || ||||| || ||||| ||| || || Sbjct 59618 CCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCG 59677 Query 16904 TTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGA 16963 | || | || | || ||| || || || | ||| | ||||| ||||| | | Sbjct 59678 ATGAT--TTCTTTTA-CTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAA 59734 Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || ||||| || || || ||||| ||||| || |||||||| || ||||| || || Sbjct 59735 CAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAAT 59794 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || ||||| ||| |||||||| ||| ||||| | || || || ||||||| ||| Sbjct 59795 CCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAG 59854 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 || || || || | |||||| || | | || | || || || ||| ||| | | Sbjct 59855 ATTCCTTCAACAGCTGCAAAAGCTACAAGACGC----CATATGTTGCCTCTCTGTCCCCA 59910 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203 |||||| | | |||| || ||||| | || | ||| | | |||| | ||| || Sbjct 59911 ATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTG 59970 Query 17204 AATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261 || | | ||| |||||| || |||| | ||||| || || || || || || |||| Sbjct 59971 AAGAGAAATTCCCTTTTT--TGG-GGTCCTTAATATAAGTGTCAATAAGGAGACTATACA 60027 Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT-CGGGCTTCCGCT 17320 |||| |||||||| ||||| || || || || || ||| || || ||||| || Sbjct 60028 TTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCCAGAAA--CAGGCGAGCTTCAGCG 60085 Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380 | || ||||| | ||| | ||| | | |||||| || || ||||| || || || Sbjct 60086 ACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCT 60145 Query 17381 GCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAG 17440 || || || || || | ||| ||||| ||||| | | | | || |||| Sbjct 60146 GCAAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAG 60205 Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500 | || | ||| || || | |||||| || || | ||||| || ||| ||| || Sbjct 60206 TGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTC 60265 Query 17501 TTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 |||||||| | ||||||||||| ||| || |||||||| | |||| Sbjct 60266 TTATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACA 60310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515748998673480