Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06]
277,711 sequences; 3,075,184,024 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq92824 244 1e-59
seq34511 235 6e-57
>seq92824
Length=186084
Score = 244 bits (270), Expect = 1e-59
Identities = 415/598 (69%), Gaps = 10/598 (2%)
Strand=Plus/Plus
Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005
|| ||||| ||||| | ||| || ||||| || || || ||||| ||||| || ||||||
Sbjct 146038 AGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGT 146097
Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065
|| || ||||| || ||||| ||||| ||||||||||| | ||| ||||| | ||
Sbjct 146098 TCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCA 146157
Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125
|| || ||||||||||| || || || || | ||||| || | | ||||| | ||
Sbjct 146158 AAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATAT 146217
Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCA---CCCACTCGGCTTTTTGCTTTATGCAA 17182
|| || ||| ||| | |||||| | ||| |||| || ||||| | || | |||
Sbjct 146218 GTTGCTTCTCTGTCCCCAATCCA---CCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAA 146274
Query 17183 TCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240
|| |||||| ||||| || | | || ||||| |||| | |||| | ||||| |
Sbjct 146275 GGCAGCGTTTCAATGGCATTGAAGAGAAATTCTC--TTTCTTTGGGGTCCTTAATATAAG 146332
Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGT 17300
| || || || || || |||||||| || |||||||| ||||| || || || || || |
Sbjct 146333 TGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCAT 146392
Query 17301 AAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGT 17360
| || || || ||||| | | || ||||| | ||| || ||| | | |||||| |
Sbjct 146393 AGAAACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCAT 146452
Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420
| || ||||| || || || || || || || || || ||||| ||||| || |
Sbjct 146453 TTACTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCT 146512
Query 17421 CCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCC 17480
| || | || ||||| || | ||| || || | |||||| || || | ||||
Sbjct 146513 CAGGCTTCAGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCC 146572
Query 17481 AAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
| || ||| |||| || |||||||| | |||||| |||| ||| || ||||||||
Sbjct 146573 AGAAGGAGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAA 146630
>seq34511
Length=68903
Score = 235 bits (260), Expect = 6e-57
Identities = 588/885 (66%), Gaps = 15/885 (2%)
Strand=Plus/Plus
Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723
|| ||| |||| || || || | || | || || || ||||| ||||| || ||
Sbjct 59438 ACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGAT 59497
Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGT 16783
|| ||||| ||||| |||||||| ||||| ||| || || || | || |||
Sbjct 59498 GAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGT 59557
Query 16784 TCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATT 16843
|| || | ||| || ||||||||||| || || || |||||| ||| ||||||
Sbjct 59558 TCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATT 59617
Query 16844 CCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCC 16903
|| || | ||| || | |||||| || ||||| || ||||| ||| || ||
Sbjct 59618 CCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCG 59677
Query 16904 TTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGA 16963
| || | || | || ||| || || || | ||| | ||||| ||||| | |
Sbjct 59678 ATGAT--TTCTTTTA-CTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAA 59734
Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023
|| || ||||| || || || ||||| ||||| || |||||||| || ||||| || ||
Sbjct 59735 CAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAAT 59794
Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083
|| ||||| ||| |||||||| ||| ||||| | || || || ||||||| |||
Sbjct 59795 CCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAG 59854
Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143
|| || || || | |||||| || | | || | || || || ||| ||| | |
Sbjct 59855 ATTCCTTCAACAGCTGCAAAAGCTACAAGACGC----CATATGTTGCCTCTCTGTCCCCA 59910
Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203
|||||| | | |||| || ||||| | || | ||| | | |||| | ||| ||
Sbjct 59911 ATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTG 59970
Query 17204 AATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261
|| | | ||| |||||| || |||| | ||||| || || || || || || ||||
Sbjct 59971 AAGAGAAATTCCCTTTTT--TGG-GGTCCTTAATATAAGTGTCAATAAGGAGACTATACA 60027
Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT-CGGGCTTCCGCT 17320
|||| |||||||| ||||| || || || || || ||| || || ||||| ||
Sbjct 60028 TTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCCAGAAA--CAGGCGAGCTTCAGCG 60085
Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380
| || ||||| | ||| | ||| | | |||||| || || ||||| || || ||
Sbjct 60086 ACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCT 60145
Query 17381 GCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAG 17440
|| || || || || | ||| ||||| ||||| | | | | || ||||
Sbjct 60146 GCAAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAG 60205
Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500
| || | ||| || || | |||||| || || | ||||| || ||| ||| ||
Sbjct 60206 TGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTC 60265
Query 17501 TTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545
|||||||| | ||||||||||| ||| || |||||||| | ||||
Sbjct 60266 TTATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACA 60310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515748998673480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |