Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq34511 309 3e-79 seq92824 300 2e-76 seq24704 107 2e-18 seq14936 95.1 1e-14 >seq34511 Length=68903 Score = 309 bits (342), Expect = 3e-79 Identities = 633/927 (68%), Gaps = 23/927 (2%) Strand=Plus/Plus Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961 || ||| |||| || || || | || | || || |||||||| ||||| || || | Sbjct 59438 ACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGAT 59497 Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGT 16021 || ||||| |||||||||||||| ||||| ||| || ||||| | || ||| Sbjct 59498 GAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGT 59557 Query 16022 TCCGTAAC-TAA-TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 ||| ||| ||| ||| |||||||||||||| || || || |||||| |||||| | Sbjct 59558 TCC--AACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCA 59615 Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139 |||| || | ||| || | ||||| |||||||| | |||||||| ||| || | Sbjct 59616 TTCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCAT 59675 Query 16140 CTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTA 16199 | ||||| || | || | ||| || || | || | |||||| ||||||| Sbjct 59676 CG---ATGATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTA 59732 Query 16200 GACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTA 16259 ||| || || || || || | || || ||||| || |||||||| ||||||||||||| Sbjct 59733 AACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTA 59792 Query 16260 ACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGA 16319 | || |||||| ||| |||||||| ||||||||| | ||||| || || |||| || Sbjct 59793 ATCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGA 59852 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379 | || || ||||||| ||||||||| | | || | || || || ||| | | | Sbjct 59853 AGATTCCTTCAACAGCTGCAAAAGCTACAAGACG----CCATATGTTGCCTCTCTGTCCC 59908 Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 ||||||| | |||| || ||||| | ||| | |||| | | |||| | ||| | Sbjct 59909 CAATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCAT 59968 Query 16440 T--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 | | | || ||| |||||| || || | ||||| || ||||| || | ||| || Sbjct 59969 TGAAGAGAAATTCCCTTTTT--TG-GGGTCCTTAATATAAGTGTCAATAAGGAGACTATA 60025 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA-TCGAGCCTCCG 16556 |||||| |||||||| || || || || || || || |||| || ||||| || | Sbjct 60026 CATTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAG 60083 Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 | | |||||||| | || | ||| ||| || ||||| || || || ||||||| Sbjct 60084 CGACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTG 60143 Query 16617 CAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCC 16676 | ||||| || || || | || ||||| ||||| | | ||| | || | | || Sbjct 60144 CTGCAAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCC 60203 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 | | | | ||| || || | |||||| || || | ||||| ||| ||| ||| | Sbjct 60204 AGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTT 60263 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796 | |||||||| | ||||||||||| ||| || ||||| || | || | | | || || Sbjct 60264 TCTTATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAAGC-ACCT-AGT 60321 Query 16797 AT--TCCTTTAACACGGGTTCATCTTC 16821 || ||||||| | ||||||||||| Sbjct 60322 ATTCTCCTTTAGGAGTGGTTCATCTTC 60348 >seq92824 Length=186084 Score = 300 bits (332), Expect = 2e-76 Identities = 429/602 (71%), Gaps = 4/602 (1%) Strand=Plus/Plus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 |||||||| ||||||| ||| || || || || || | || || ||||| || |||||| Sbjct 146038 AGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGT 146097 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 || ||||||||||||||||| |||||| ||||||||||| | ||||||||| | ||| Sbjct 146098 TCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCA 146157 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || || || |||||||| || || ||||||| |||||||| | | ||||| | || Sbjct 146158 AAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATAT 146217 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 || || ||| | | | |||||| | |||| || ||||| | ||| | |||| | Sbjct 146218 GTTGCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGC 146277 Query 16424 ATCGTTTCTATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTAT 16481 | |||||| ||||| || | | || ||||| |||| | || | ||||| || | Sbjct 146278 AGCGTTTCAATGGCATTGAAGAGAAATTCTC--TTTCTTTGGGGTCCTTAATATAAGTGT 146335 Query 16482 CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGA 16541 |||| || | ||| |||||||| || |||||||| || || || || || || ||||||| Sbjct 146336 CAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGA 146395 Query 16542 AGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCA 16601 | || ||||| || | | |||||||| | || || ||| ||| || ||||| | Sbjct 146396 AACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTA 146455 Query 16602 CGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAG 16661 | || || |||||||| ||||| || || || ||| ||||| ||||| || |||| Sbjct 146456 CTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAG 146515 Query 16662 ATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAA 16721 | || | | ||| | | | ||| || || | |||||| || || | |||||| | Sbjct 146516 GCTTCAGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGA 146575 Query 16722 AGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGA 16781 || ||| |||| || |||||||| | |||||| |||| ||| || ||||| || | || Sbjct 146576 AGGAGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGA 146635 Query 16782 CG 16783 || Sbjct 146636 CG 146637 >seq24704 Length=62651 Score = 107 bits (118), Expect = 2e-18 Identities = 94/116 (81%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||| || |||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct 10247 TCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTG 10188 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 | |||| |||| | ||||| || || ||||||| || || ||||||| |||||| Sbjct 10187 AGCCAG-ATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA 10133 Score = 86.0 bits (94), Expect = 6e-12 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 16249 GGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGA 16308 ||||||||||||||| |||| || |||| ||||| | ||||||||| | ||||| || Sbjct 10071 GGAAAAAGTTAACCCAGGCA-TTAAACTCG-TTCTTGAGCCAGAATATGGATGCAAAAGA 10014 Query 16309 CCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 || |||||||| || || ||||||| ||||||||| Sbjct 10013 ACCAGAAAAGAAGATTCCTTCAACAGCTGCAAAAGC 9978 >seq14936 Length=40044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||| ||||| ||||| ||||| | || ||||| |||| ||||| Sbjct 20548 TCATCTCTGCTGATGAGTTCATTGGAGAAAGTGAGACCAGGCATAAGACCTCTCTTCTTA 20607 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 | ||||||||| |||||||| || ||||| ||||| || || || |||| |||||| Sbjct 20608 AGCCAGAATATAGCAGCAAAAGAGCCCGAGAAGAAAATCCCTTCCACAGCAGCAAAA 20664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509639082444520