Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq80381 167 2e-36 seq2532 165 6e-36 seq15296 145 5e-30 seq185965 131 1e-25 seq25758 123 2e-23 seq84504 122 6e-23 seq1233 107 1e-18 seq109705 105 5e-18 seq51259 104 2e-17 >seq80381 Length=38195 Score = 167 bits (184), Expect = 2e-36 Identities = 247/342 (72%), Gaps = 10/342 (3%) Strand=Plus/Plus Query 3967 TATTAATGAT-TCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCAC 4025 ||||||| || | || ||||||||||||||||| |||| || | ||| ||||| || | Sbjct 31580 TATTAATTATATTTTTTCATATACTTCAAATTTATACTGTATGCCTTT-TCTTCCTGAAT 31638 Query 4026 ATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGG 4085 || || |||||||| | |||||||| |||||| ||||||| |||||||| |||||| Sbjct 31639 ATCAGTAAGAACACCTAGATATTCTGGAGGAAGTTT-TATTTCTTTAGATCAATTTCTGG 31697 Query 4086 AAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCA 4145 |||||| ||||| | || || ||||||| || || ||||| || | ||| Sbjct 31698 AAAAAATGTGTCCCTCTCGAATTCTTGCAAAATTCTTGTCACGGTCACT----GATGAAC 31753 Query 4146 TGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTAC 4205 || | |||| |||| ||| | | ||| || |||||| || ||| | ||||||||| Sbjct 31754 AGGTTTCTTCATCACTTCCTTAAAAATAGAGCTGCCTCCACCTACCCAAATCATGTCTAC 31813 Query 4206 TTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAA 4265 ||||||||| |||||| ||| | ||| | ||| | ||||| | ||| || || || Sbjct 31814 CATATTTGCTAGTTCTGGAAGTTTGAGAAG-TCTAATGTATCATACAGACTTTTGGC-AA 31871 Query 4266 AAAATGAGCTCTATGTGGAAGCT-CCTTTAGTTCCTTGCTGA 4306 | |||||||| ||||| | |||| ||||| |||||| Sbjct 31872 GATATGAGCTCCCAAGGGAAGGTCCCTTCAGTTCTCTGCTGA 31913 >seq2532 Length=66247 Score = 165 bits (182), Expect = 6e-36 Identities = 444/678 (65%), Gaps = 22/678 (3%) Strand=Plus/Plus Query 101540 GCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAAT-ATAATGTCATCTGC 101598 ||||| | ||||||||| ||||| | || |||| || |||| | | || | || Sbjct 36420 GCCATCTCCATTTTAATAGCTGGGTGAGCATTGTAGTCTT-TAATCAGGAAATCCTTAGC 36478 Query 101599 TTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAGG 101658 || || |||||| || | ||| ||| | || | | || |||| || ||||| || Sbjct 36479 CTTGAAATCATCAGTGGTTTCAACTTTTTGAAGAATTTTGAGCTTTGGGAAAGGTCTTGG 36538 Query 101659 AGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCC 101718 | || | ||| ||||| || | |||| |||| | || |||||||||||||| Sbjct 36539 TTCTTGCTGAATCTGAATTTTCAGTGGCCCAATATGATTCAAGTATATGTGAGCATCTCC 36598 Query 101719 TATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAA 101778 | | | || | ||| || || | | ||| | || |||||||||||| | || | Sbjct 36599 CAGAATGTGTACAAAATCACCTGACTTTAGGCCTGGGATGTGAGCAATCATGTAGGTGAG 36658 Query 101779 AAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATA 101838 || ||||| || |||||||| |||| ||| | ||||| || | ||| || || Sbjct 36659 CAGGGAATAACTGGCAATGTTGAATGACACCTGGAGGCCCATGTCTCCACATCACTGGTA 36718 Query 101839 CAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAGGCGG 101898 |||||||| |||||| |||| | ||||| || || | |||| | || || Sbjct 36719 TAGTTGACAAAAAAGCTCACCATTCAATACATAGAACTGGTAGAGAGCATGGTATGGAGG 36778 Query 101899 CAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGT 101958 || |||| ||||| ||| | |||||||| |||||| | |||||||| || Sbjct 36779 CAGTGCCATCAGAGGAAGATCTTTAGGATTCCAAGTACACATAATGATCCTTCTGTCATC 36838 Query 101959 AGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATA 102018 |||||| ||||| | | ||||| ||||||| || ||| Sbjct 36839 AGGGTTGGTTTTGGTTGCCTCAAT------------------GACTCCTTGCCCAGAATA 36880 Query 102019 ATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAG 102077 ||| | | || | |||| |||||||| || |||| |||||||| || |||||||| | Sbjct 36881 ATCTGTGTTCATC-TCTTTGTATTCTGCCCCACAATGTCTCCACTGGAAACCATACACTG 36939 Query 102078 GTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATC 102137 |||| | ||||||||| || ||| | || || | || || ||||| || ||||| Sbjct 36940 GTCCCAAATCTCCTTCCTCCCTGGTAGTGAACCCCTGCTTGTCCAAAAAGTCTCGAGATC 36999 Query 102138 CATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTC 102197 |||| |||||||| || | ||| | || || |||||||| | || || || Sbjct 37000 CATTGGCATCCCAGATTTTCACTTCTTTGGCAGAGAGCTCTTTAGCATTTGTGGAACCCT 37059 Query 102198 TGATAAACCACAACAGTT 102215 | |||||||||| ||||| Sbjct 37060 TAATAAACCACAGCAGTT 37077 >seq15296 Length=69570 Score = 145 bits (160), Expect = 5e-30 Identities = 477/738 (65%), Gaps = 19/738 (3%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| | || | ||||||||| || || ||||| |||||||| | | | ||| Sbjct 63831 TTAGACAACTATCTCCATTTTAATAGCTGGATGAGGGTTGTAGTTTTCAATCAGGAAGTC 63890 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 || || || || ||||||||| | ||| || | || | | || | || || || Sbjct 63891 CTCAGCCTTGAAATCATCAATGGTTTCAACTTTGTGAAGAATTTTGAGCTTAGGGAAAGG 63950 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 ||| | | || | ||| ||||| | | |||| |||| | | |||||||| Sbjct 63951 TCTTGATTCTTGCTGAATCTGAATTTTCAATGACACAATATGATTGAAGTGCATGTGAGC 64010 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 |||||| | ||| || | ||| || || ||| || ||||| |||||||||||| | Sbjct 64011 ATCTCCCAGAGTGTGTACAAAATCACCTGGCTTCAGGCCTGTGACGTGAGCAATCATGTA 64070 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 || | || ||| | || |||||||| |||| ||| | || |||||| Sbjct 64071 GGTGAGTAGGGAAGAACTGGCAATGTTGAATGACACACTGAAGCCCATA----------- 64119 Query 101833 TTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACA 101892 || || ||||| ||||||| |||| | || || || || | | |||| || Sbjct 64120 ---GTATAGCTGACAAGAAAGCTCACCATTCAATACGTAGAACTGGCAGAGAGCATGGCA 64176 Query 101893 AGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCT 101952 || |||| |||| ||||| ||| | ||| ||||||||||| | |||||||| Sbjct 64177 TGGAGGCAGTGCCATCAGAGGAAGTTCTTTAGGATTTCAAGCACACATAATGATCCTTCT 64236 Query 101953 ATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCC 102012 || |||||| |||| || || || || | | | || ||| || ||||||| || Sbjct 64237 GTCATCAGGGTTGGTTTCGATTGTGTCCATGACTTTCTGTACTTGATCCACTCCTTGCCC 64296 Query 102013 TTTATAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071 |||||| | | || | |||| |||| | || ||||| |||||| | ||| Sbjct 64297 AGAATAATCTGTGTTCATC-TCTTTGCATTCAGTCCCAAAATGTCTCCACAG-GCGCCAC 64354 Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131 |||| ||||| | ||||||||| | ||| | || | | || || ||||| || Sbjct 64355 ACACTGGTCCCAAATCTCCTTCCTTACTGGTAGTGAACCGCTGCTTGTCCAAAAAGTCTC 64414 Query 102132 TAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAG 102191 |||||||| |||||||| || | || || || || | |||||| | || | Sbjct 64415 AAGATCCATCAGCATCCCAGATTTTCAGTCCTTTGGCAGAGAACTCTTTAGCATTTGTGG 64474 Query 102192 -ATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTA 102250 ||||| | | |||||||| ||| | || | ||||| |||| || || ||| || Sbjct 64475 AATCCT-TAACAAACCACATCAGGCCCTCCAGCACACCCTTCCAGAACACAAGCTTGGTT 64533 Query 102251 GTTAAAAGTGGAAATTCA 102268 || | | ||||| ||| Sbjct 64534 GTCAGCAAAGGAAACTCA 64551 >seq185965 Length=1074 Score = 131 bits (144), Expect = 1e-25 Identities = 130/167 (78%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| || || |||| ||||||| |||| | || ||| | ||| |||||||| |||| Sbjct 322 ATTAATCATGTTTTTCATGTACTTCACATTTATGCTGAATGCCTTTTTCTTCTTGGACAT 381 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 || |||||||| |||||| ||| | |||||| ||| ||| || |||| |||||||| Sbjct 382 CAGTAAGAACACCTGGATACTCTGGGAGAAGTTTATATCTCTTTA-ATCAGTTTCTGGAA 440 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||| ||||| ||| ||| || || |||||||||||| Sbjct 441 AAAACATGTCACTCTCAAATTCTCGCAAAATTCTTGTCACAAACAGT 487 >seq25758 Length=7456 Score = 123 bits (136), Expect = 2e-23 Identities = 242/347 (70%), Gaps = 8/347 (2%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 |||||||| |||||| | |||||| | || |||||| ||||| || || |||| | | Sbjct 2725 ATTCCAAGAACACATAATGATCCTT-TGTCATCAGGGTTGGTTTTGATTGTGTCAA-CGA 2668 Query 101986 CTGTTT-TAATTGGTCAACTCCTTCTCCTTTA-TAATC-GCGCCCAACACCTTTATATTC 102042 || | | || ||| || ||||||| |||| | ||||| | | | | | ||||||||| Sbjct 2667 CTTTCTGTAGTTGATCCACTCCTT-TCCTGGAATAATCTGTGTTTATCTC-TTTATATTC 2610 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 ||| || ||||| |||||||| || ||||||| ||||| | ||||||||| || ||| Sbjct 2609 TGCCCCAAAATGTCTCCACTGGAAGCCATACAT-GGTCCCAAATCTCCTTCTTCCCTGGT 2551 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || ||||| ||||| | || |||||| ||||||| || | ||| | Sbjct 2550 AGTGAACCCCTTCTTATCCAAAAAGTCTTGAGGTCCATTGGCATCCCCGATTTTCACTGC 2491 Query 102163 AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222 || || |||||||| | || || || | ||||||||||| ||||| || | Sbjct 2490 TTTGGCAGAGAGCTCTTTAGCATTTGTGGAACCATTAATAAACCACAATAGTTCCTCCAG 2431 Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCAT 102269 ||||| |||| || || |||| | || | | ||||| |||| Sbjct 2430 TACACCCTTCCAGAACACATTCTTGATTGTCAGCAAAGGAAACTCAT 2384 >seq84504 Length=29057 Score = 122 bits (134), Expect = 6e-23 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| |||||||||| | |||||| ||| |||||||||| || ||||||||||| Sbjct 22678 CTTCAGTTCTCTGCTGAGAACTAAATTAATCCTGTCTTTTAAAGGTCGATTCTTCTCAGG 22737 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||||||||| || ||||| |||| | |||||||||| ||| Sbjct 22738 AATGGAGAACCAAGTCTTCTTTCCCATTATCAAGAGATTCTGTTTACCTG 22787 >seq1233 Length=18904 Score = 107 bits (118), Expect = 1e-18 Identities = 334/509 (66%), Gaps = 10/509 (2%) Strand=Plus/Minus Query 101590 GTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAA 101649 ||| |||| || || ||||||||| | | | ||| | || | | || | || || Sbjct 13911 GTCTTCTGTCTTGAAATCATCAATGATTTCAGCTTTTTAAAGAATTTTGAGCTTAGGGAA 13852 Query 101650 CGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTG 101709 ||||| || || | | ||| ||||| || | |||||| |||| | ||| | || Sbjct 13851 AGGTCTTGGTTCTCACTGAATCTGAATTTTCAGTGGATCAATATGATTCAAATATAGATG 13792 Query 101710 AGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCAT 101769 ||||||||| | || || | ||| || || ||| || || | |||| ||||| Sbjct 13791 AGCATCTCCCAGTGTGTGAACAAAATCACCTGGCTTCAGGACTGTAATGTGAGTGATCAT 13732 Query 101770 GCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTA-ACCCCATATCAGCTG 101828 | | || | || ||||| || |||||||| || ||||| | | |||||| | | Sbjct 13731 GTAGGTGAGCAGGGAATAACTGGCAATGTTGAACATCACTCTGAGGTCACATATCTCCAG 13672 Query 101829 ATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACAT 101888 || || || | ||||| ||||||| |||| || ||||| ||||| | | | Sbjct 13671 ATTGCTGGTATAACTGACAAGAAAGCTCACCATTCCATACATAGAATTGGCAGAGAGTGT 13612 Query 101889 GACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCC 101948 | || || || | |||| ||||| ||| | |||||||| |||||| | ||| Sbjct 13611 GGCATGGAGGTAGAGCCATCAGAGGAAGATCTTTAGGATTCCAAGAACACATAATAATCT 13552 Query 101949 TTCT-ATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCT 102007 || | ||| |||| | ||||| || || ||||| | | || ||| || |||||| Sbjct 13551 TTGTCATC---AGGGCTGGTTTTAATTGTGTCAATGGCTTTCTGTAGTTGATCCACTCCT 13495 Query 102008 TCTCCT--TTATAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGA 102064 | ||| |||||| | || | |||| |||||||| || ||||| ||||| || Sbjct 13494 T-GCCTGGGAATAATCTATGTTCATC-TCTTTGTATTCTGCCCCAAAATGTCTCCATTGG 13437 Query 102065 AATCCATACACAGGTCCAAGATCTCCTTC 102093 || | ||| || ||| | | ||||||||| Sbjct 13436 AAGCTATATACTGGTTCCAAATCTCCTTC 13408 >seq109705 Length=43380 Score = 105 bits (116), Expect = 5e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| |||||||| || ||||| ||||||||||| ||| |||| |||| | |||||||| Sbjct 31214 CTTTGTATTCTGCCCCAAAATGTCTCCACTGAAAGCCAAACACTGGTCACAAATCTCCTT 31155 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| | || || || || ||||| || | ||||||| |||||||| | Sbjct 31154 CCTCTCTGGTAGTGAACCCGTTCTTGTCCAAAAAGTCTCGAAATCCATTGGCATCCCAGA 31095 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 102212 | | ||| || || || |||||||| | || || || |||||||||| || Sbjct 31094 TTTTCACTCCTTTGGCAGACAGCTCTTTAGCATTTGTGGAACCCTCAATAAACCACAGCA 31035 Query 102213 GTTCTTCAACAACACCTCTCCAAAATAC 102240 |||| || | ||||| |||| || || Sbjct 31034 GTTCCTCCAGCACACCCTTCCAGAACAC 31007 >seq51259 Length=79122 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 26958 GGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAATTAGGG 27017 || || || || |||||||| |||||||| ||||||||||| ||||| || ||| | | Sbjct 53264 GGGGTCACACAAGTGCAGCCCACAGTCACCAGCATCTTCTCCAGCCTGAAGGAAGTGGAA 53323 Query 27018 CAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAGTTCATG 27077 ||| | | | || |||| | || | ||||| || ||||| | ||| ||||||| | Sbjct 53324 CAGTTTGGGAACTCTCTGCGGAGGACCAAGATCTCCTGCTGGATGGCGACAGAGTTCAGG 53383 Query 27078 TGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCTTCCCAA 27137 |||| ||| || ||||| || || || | || ||| ||| || ||||| || ||||| Sbjct 53384 TGGTGGTCCACTTTCCCCTCGGCGTTGATGCAGCCTGAGTGACGGCACTTAGCCTCCCAG 53443 Query 27138 AT 27139 || Sbjct 53444 AT 53445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360028508172461