Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq32393 91.5 1e-13 seq93334 84.2 2e-11 seq55504 82.4 7e-11 seq53778 82.4 7e-11 >seq32393 Length=14028 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||||| || || |||| ||| || ||||| ||| | || |||| || Sbjct 8138 ATGCAGATTTTCATAAAGACTTTGAGGGGGAAGACCATCACCCCTGAGGTCAAACCATCA 8197 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || || | ||||| |||||| | ||| |||||| Sbjct 8198 GATACTATTGAAAATGTCAAAACCAAGATACCAGATAAGGAAGGTATTCCCCCTGATCAA 8257 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| || || |||||||||| | ||| | | || ||||| Sbjct 8258 CAAAGATTGATTTTTGCTGGGAAGCAACTGGAAGGTGGATGTACTTTTTCTGACTACAAC 8317 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||||||||| ||||| Sbjct 8318 ATTCAGAAGGAATCTACCCTTCA 8340 >seq93334 Length=53926 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 |||||||||||| | || ||||| ||||| ||||| |||||| | ||| || | || Sbjct 25556 GATCAACAAAGATTGATTTTTGCTGGCAAGCAACTAGAAGATGGATACACTTTGTCTGAC 25615 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||||||||| ||||| Sbjct 25616 TACAACATTCAGAAGGAATCTACCCTTCA 25644 >seq55504 Length=131191 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | ||| |||||||||||| |||| ||||| ||||| |||||||| Sbjct 32689 GATAATGAAGGTATTCCCCCTGATCAACAAAGATTTATTTTTGCTGGCAAGTAACTGGAA 32748 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTT 29162 ||| | ||| || || |||| |||||||||| |||||| ||| Sbjct 32749 GATGAAAGTACTTTGTGTGACTACAGTATTCAGAAGACATCTACCCTT 32796 >seq53778 Length=21761 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| ||| |||||||||||| | || ||||| ||||| || |||||| Sbjct 17504 GATAAGAAAGGTACTCCCCCTGATCAACAAAGATTGATTTTTGCTGGCAAGCAGCTGGAA 17445 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| ||| || | || ||||| ||||||||||||||||| ||||| Sbjct 17444 GATGGACGTACTTTGTCAGACTACAACATTCAGAAGGAATCTACCCTTCA 17395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426886252769705