Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq20275 138 1e-27 seq2012 131 2e-25 seq86693 87.8 2e-12 seq3044 87.8 2e-12 >seq20275 Length=61036 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| || || | ||||||||| ||||||| || ||||| |||||||| ||| Sbjct 38069 AGGCCTGTGACATGAGCAATCATGTAGGTGAGCAGGGCATAACTGGCGATGTTGAACGGC 38128 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 ||||| || |||||||| || ||||||||||||||||| || || ||||| || | Sbjct 38129 ACCCCGAGGCCCATGTCTCCAGAGCGCTGGTACAGCTGACAAGAAAGCTCACCATTCAGT 38188 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| || ||||| || ||||| ||||| Sbjct 38189 ACGTAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCAT 38229 >seq2012 Length=71636 Score = 131 bits (144), Expect = 2e-25 Identities = 512/798 (64%), Gaps = 19/798 (2%) Strand=Plus/Minus Query 176395 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 176454 ||||||||||| | |||||| | || | | | |||| || |||| | | || | Sbjct 31054 TGGGCAATATCATGGTGGTGCTGATACTTACCAAGTACAAGAGATTCAAGAGTATGACCA 30995 Query 176455 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 176514 |||| | || | || ||| | || || || |||| || || || || | || || | Sbjct 30994 ACATCTATCTCCTCAATTTGTCCATTTCAGATCTGCTTTTCCTGTTTACACTTCCTTTCT 30935 Query 176515 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 176574 |||| ||||| | | | | |||| ||| ||||||| | || ||||||| | | Sbjct 30934 GGATTCACTACGCTAG---GCAAAATGACTGGGTTTTTGGTCATACCATGTGTAAGATCC 30878 Query 176575 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 176634 || || | | |||| || | || || | |||||| ||| ||||| | || Sbjct 30877 TCTCTGGCCTTTATTACCTGGGCTTATATAGTGAAATCTTTTTCATTGTCCTGTTGACCA 30818 Query 176635 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCT 176694 | ||||||||||||||||| ||||||||||| ||| ||| || ||||| |||| Sbjct 30817 TTGACAGGTATCTAGCTGTAGTCTATGCTGTGTTTGCCCTGAAAGCCAGGACAGTCACCT 30758 Query 176695 GTGGCATAGTTACCTGTGTATGT-ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAA 176753 |||||| | ||| | | ||| || ||| || ||| ||| | || ||||| Sbjct 30757 TTGGCATCTTCACCAGCAT-TGTCACGTGGGGCTTGTCAGCATTGGCAGCTCTTCCTGAG 30699 Query 176754 TTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAG---TGTGATCCTTACTAC 176810 ||| ||||||||| ||| | |||| ||| | ||| || |||| ||| Sbjct 30698 TTTATCTTTCATGAGTCCCAGCAGGACA-TGGAAAA--TCATATATGCAGTCCTCGCTAT 30642 Query 176811 CCAGAG----ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTT 176866 || ||| ||| ||||||| || ||| ||| | | | ||| || || Sbjct 30641 CCTGAGTATGATGAAGACAAATG----GAAGCGTTTCCAGGCTCTGAGAATGAACATATT 30586 Query 176867 AAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACT 176926 | || | | || || ||| ||| |||||||| | ||| |||| || ||| Sbjct 30585 GGGACTTGCTATTCCATTGGCCATCATGATCATCTGCTACACAGGAATCATCAAAAAACT 30526 Query 176927 GTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGT 176986 | | | | | | | |||||||| ||||| ||||||||||||||||||||||| | Sbjct 30525 GCTCGGAAGTCGTAATGACAAGAAGTATAAGGCAGTCAGGCTCATCTTTGTCATCATGAT 30466 Query 176987 GGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGC 177046 | || ||| |||| |||||||| || ||| | ||| || |||||| | ||||| || Sbjct 30465 TGTCTTCTTTCTTTTCTGGACACCTTATAACCTCACTCTTCTTCTGTCTGCTTTTCAAGC 30406 Query 177047 AACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 177106 | | || |||| | | |||| |||| | ||||||| || ||| | || Sbjct 30405 ATCTTTTTTTAAGGGGGACTGTGAGAGAAGCAAACAACTGGACATAGCAATGCAAGTGAC 30346 Query 177107 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 177166 || | ||||| || || |||||| |||| || ||||| || || || || ||||| Sbjct 30345 TGAAGTGATTGCCTATACTCATTGTTGCGTCAATCCTGTGATTTATGCCTTTGTTGGGGA 30286 Query 177167 GAAGTTTAGAAGACACCT 177184 ||||| | | |||| Sbjct 30285 ACGATTTAGGAAATACCT 30268 Score = 131 bits (144), Expect = 2e-25 Identities = 512/798 (64%), Gaps = 19/798 (2%) Strand=Plus/Minus Query 9509 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 9568 ||||||||||| | |||||| | || | | | |||| || |||| | | || | Sbjct 31054 TGGGCAATATCATGGTGGTGCTGATACTTACCAAGTACAAGAGATTCAAGAGTATGACCA 30995 Query 9569 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 9628 |||| | || | || ||| | || || || |||| || || || || | || || | Sbjct 30994 ACATCTATCTCCTCAATTTGTCCATTTCAGATCTGCTTTTCCTGTTTACACTTCCTTTCT 30935 Query 9629 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 9688 |||| ||||| | | | | |||| ||| ||||||| | || ||||||| | | Sbjct 30934 GGATTCACTACGCTAG---GCAAAATGACTGGGTTTTTGGTCATACCATGTGTAAGATCC 30878 Query 9689 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 9748 || || | | |||| || | || || | |||||| ||| ||||| | || Sbjct 30877 TCTCTGGCCTTTATTACCTGGGCTTATATAGTGAAATCTTTTTCATTGTCCTGTTGACCA 30818 Query 9749 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCT 9808 | ||||||||||||||||| ||||||||||| ||| ||| || ||||| |||| Sbjct 30817 TTGACAGGTATCTAGCTGTAGTCTATGCTGTGTTTGCCCTGAAAGCCAGGACAGTCACCT 30758 Query 9809 GTGGCATAGTTACCTGTGTATGT-ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAA 9867 |||||| | ||| | | ||| || ||| || ||| ||| | || ||||| Sbjct 30757 TTGGCATCTTCACCAGCAT-TGTCACGTGGGGCTTGTCAGCATTGGCAGCTCTTCCTGAG 30699 Query 9868 TTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAG---TGTGATCCTTACTAC 9924 ||| ||||||||| ||| | |||| ||| | ||| || |||| ||| Sbjct 30698 TTTATCTTTCATGAGTCCCAGCAGGACA-TGGAAAA--TCATATATGCAGTCCTCGCTAT 30642 Query 9925 CCAGAG----ATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTT 9980 || ||| ||| ||||||| || ||| ||| | | | ||| || || Sbjct 30641 CCTGAGTATGATGAAGACAAATG----GAAGCGTTTCCAGGCTCTGAGAATGAACATATT 30586 Query 9981 AAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACT 10040 | || | | || || ||| ||| |||||||| | ||| |||| || ||| Sbjct 30585 GGGACTTGCTATTCCATTGGCCATCATGATCATCTGCTACACAGGAATCATCAAAAAACT 30526 Query 10041 GTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGT 10100 | | | | | | | |||||||| ||||| ||||||||||||||||||||||| | Sbjct 30525 GCTCGGAAGTCGTAATGACAAGAAGTATAAGGCAGTCAGGCTCATCTTTGTCATCATGAT 30466 Query 10101 GGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGC 10160 | || ||| |||| |||||||| || ||| | ||| || |||||| | ||||| || Sbjct 30465 TGTCTTCTTTCTTTTCTGGACACCTTATAACCTCACTCTTCTTCTGTCTGCTTTTCAAGC 30406 Query 10161 AACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 10220 | | || |||| | | |||| |||| | ||||||| || ||| | || Sbjct 30405 ATCTTTTTTTAAGGGGGACTGTGAGAGAAGCAAACAACTGGACATAGCAATGCAAGTGAC 30346 Query 10221 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 10280 || | ||||| || || |||||| |||| || ||||| || || || || ||||| Sbjct 30345 TGAAGTGATTGCCTATACTCATTGTTGCGTCAATCCTGTGATTTATGCCTTTGTTGGGGA 30286 Query 10281 GAAGTTTAGAAGACACCT 10298 ||||| | | |||| Sbjct 30285 ACGATTTAGGAAATACCT 30268 >seq86693 Length=25353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 211/317 (67%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 9478 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 9537 |||||| || | ||||| || || || |||||||| | | |||||| | || || Sbjct 21206 CTGTATGTGGTGGTGTTCATCACAGGCCTGCTGGGCAATGCCATGGTGGTGTTGATCCTC 21265 Query 9538 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 9597 | || |||| || |||| | | | || || || | || | |||||||| | || Sbjct 21266 ACAAAGTACAAGAGACTCAAGACCATGACCAATATCTACCTTCTCAACTTGGCCCTCTCC 21325 Query 9598 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATA--TTGGAATGTATCATG 9655 ||| |||| || || | || | ||||| ||||| |||||| ||| || | | Sbjct 21326 GACCTGCTTTTCCTCATTACGCTTCCATTCTGGATTCACTATGAGTTGCAAAGGGAC--- 21382 Query 9656 ATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGT 9715 | || |||| || || || |||||||||| ||| || ||| ||| || | | Sbjct 21383 -TGGGTCTTTGGGGATG-CCATGTGTAAACTACTCTCAGGATTGTATTATTTGGGCTTAT 21440 Query 9716 ACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATG 9775 |||| | |||| | ||||||||||||||| || || ||||| || || ||||| ||| Sbjct 21441 ACAGTGAAATCTTCTTCATCATCCTGCTAACTGTCGATAGGTACCTGGCCATTGTCCATG 21500 Query 9776 CTGTAACTGCTTTGAGG 9792 | || |||| | ||| Sbjct 21501 CGGTGTTTGCTATTAGG 21517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 211/317 (67%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 176364 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 176423 |||||| || | ||||| || || || |||||||| | | |||||| | || || Sbjct 21206 CTGTATGTGGTGGTGTTCATCACAGGCCTGCTGGGCAATGCCATGGTGGTGTTGATCCTC 21265 Query 176424 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 176483 | || |||| || |||| | | | || || || | || | |||||||| | || Sbjct 21266 ACAAAGTACAAGAGACTCAAGACCATGACCAATATCTACCTTCTCAACTTGGCCCTCTCC 21325 Query 176484 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATA--TTGGAATGTATCATG 176541 ||| |||| || || | || | ||||| ||||| |||||| ||| || | | Sbjct 21326 GACCTGCTTTTCCTCATTACGCTTCCATTCTGGATTCACTATGAGTTGCAAAGGGAC--- 21382 Query 176542 ATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGT 176601 | || |||| || || || |||||||||| ||| || ||| ||| || | | Sbjct 21383 -TGGGTCTTTGGGGATG-CCATGTGTAAACTACTCTCAGGATTGTATTATTTGGGCTTAT 21440 Query 176602 ACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATG 176661 |||| | |||| | ||||||||||||||| || || ||||| || || ||||| ||| Sbjct 21441 ACAGTGAAATCTTCTTCATCATCCTGCTAACTGTCGATAGGTACCTGGCCATTGTCCATG 21500 Query 176662 CTGTAACTGCTTTGAGG 176678 | || |||| | ||| Sbjct 21501 CGGTGTTTGCTATTAGG 21517 >seq3044 Length=71009 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 138163 TTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGGATCATCTCAGACAGGGCCTGG 138222 ||||| ||| |||||||| ||||||||||||||||| ||||| || |||| ||||||| Sbjct 9449 TTCTCCGCCCAAGGCATCACTTCCTCCAGGTAAAACTGAATCATTTCTGACAAGGCCTGG 9390 Query 138223 CAGCCCAGGTAACCCT 138238 ||||| ||||||| || Sbjct 9389 CAGCCAAGGTAACTCT 9374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588028414772440