Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq51522 178 2e-39 seq266702 150 2e-31 seq264181 150 2e-31 >seq51522 Length=55850 Score = 178 bits (196), Expect = 2e-39 Identities = 215/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 83104 GCTGTACCTGCGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGC 83163 |||||| || ||| || | || |||| | |||||| |||||| || |||||||||| Sbjct 13231 GCTGTATCTCTTCACAGGTGCCCCATCAGGATCCACCAGGAACTTTTCAAAGTTCCAGGA 13290 Query 83164 CACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCT 83223 | ||| || | |||||||||||||||| |||| || |||||| ||| || | | Sbjct 13291 GATGTCATTCCTGCACACTGGAGACCAGATGATGAACTTTGGGTCGGTCATAAGAGAGAC 13350 Query 83224 CATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCT 83283 || ||||| || | ||||| ||||| ||||||||||| ||||| || || ||| | Sbjct 13351 AGCATCATCGCTCGGGACTGGCAGTGCCTCCCGTAGGAAGGCAAAGAGAGGGTGAGCCTT 13410 Query 83284 TGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGG 83343 | || || ||||| |||||||| |||||||||||||| ||||| || || | || || Sbjct 13411 CTCCCCATTCACCTCACACTTCTCAAAGAGCATAAAGTTGGGCTCAAACCCATCGCCCGG 13470 Query 83344 ACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGT 83396 |||||| |||| |||| || |||||| | |||| | | || ||||||| Sbjct 13471 TCGGACGAATTTCAAGGAATTCAGGATCTCCTCGTTCTTGCCATTCTCCTGGT 13523 Score = 150 bits (166), Expect = 2e-31 Identities = 135/167 (81%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| || ||||| | ||||| || || || |||| Sbjct 15416 CCTGGTGGCCGAACTGGTTGCAGGGGAAGCCGAGCACCGCGAGCCCGCGCGCCCCGAGGC 15475 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || |||||||| ||||||||| ||||| || |||||||| | ||||| |||||||| | Sbjct 15476 GCTCCTGCAGCTGGTTCATCTGCGTGTAGTCGCGGACCGTCGTGCCTCAAAGGGACGCCA 15535 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTA-AGAAGCCTAAGCTCAC 83556 ||||||||||||||| ||| |||||| | ||| ||| | |||||| Sbjct 15536 CGTTCTCGATGAGCAGAACCTTGCCCCGCAGAGAGGCC-AGGCTCAC 15581 >seq266702 Length=712 Score = 150 bits (166), Expect = 2e-31 Identities = 135/167 (81%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| || ||||| | ||||| || || || |||| Sbjct 582 CCTGGTGGCCGAACTGGTTGCAGGGGAAGCCGAGCACCGCGAGCCCGCGCGCCCCGAGGC 523 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || |||||||| ||||||||| ||||| || |||||||| | ||||| |||||||| | Sbjct 522 GCTCCTGCAGCTGGTTCATCTGCGTGTAGTCGCGGACCGTCGTGCCTCAAAGGGACGCCA 463 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTA-AGAAGCCTAAGCTCAC 83556 ||||||||||||||| ||| |||||| | ||| ||| | |||||| Sbjct 462 CGTTCTCGATGAGCAGAACCTTGCCCCGCAGAGAGGCC-AGGCTCAC 417 >seq264181 Length=737 Score = 150 bits (166), Expect = 2e-31 Identities = 135/167 (81%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| || ||||| | ||||| || || || |||| Sbjct 388 CCTGGTGGCCGAACTGGTTGCAGGGGAAGCCGAGCACCGCGAGCCCGCGCGCCCCGAGGC 447 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || |||||||| ||||||||| ||||| || |||||||| | ||||| |||||||| | Sbjct 448 GCTCCTGCAGCTGGTTCATCTGCGTGTAGTCGCGGACCGTCGTGCCTCAAAGGGACGCCA 507 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTA-AGAAGCCTAAGCTCAC 83556 ||||||||||||||| ||| |||||| | ||| ||| | |||||| Sbjct 508 CGTTCTCGATGAGCAGAACCTTGCCCCGCAGAGAGGCC-AGGCTCAC 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606683430398440