Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5191 100 4e-16 seq53778 84.2 3e-11 >seq5191 Length=73165 Score = 100 bits (110), Expect = 4e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | ||||| || | ||| ||||| || || | || | ||| | Sbjct 37575 ATGCAGATATTTGTGAAGACTCTGATAGGGAAAACCATCACCCTTGATGTGGAATTGTCT 37634 Query 124599 GATACAATTTCTAATTTAAAACAG--AAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||||||| ||| | | | || ||||| |||||||||||||| || ||||||| Sbjct 37635 GATACAATTG--AATCGATCAAGGCCAAGATTCAGGATAAAGAAGGTATTCCTCCTGATC 37692 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 ||||||| | || |||||||| ||||| |||| || | | || || | ||||||| Sbjct 37693 AACAAAGATTGATGTTTGCAGGCAAACAGCTAGAAGAAGGATGTACTTTGGCTGATTATA 37752 Query 124717 ATATTCAAAAAGA 124729 | |||||||| || Sbjct 37753 ACATTCAAAAGGA 37765 >seq53778 Length=21761 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 124563 ACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAG 124622 ||||| || || || || | ||||||||| | ||||| ||| ||| | ||| Sbjct 17573 ACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGATACTATTGAAAATGTCAAAGCC 17514 Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || |||||||| |||||| || |||||||||||||| | |||||||| || || Sbjct 17513 AAGATACAAGATAAGAAAGGTACTCCCCCTGATCAACAAAGATTGATTTTTGCTGGCAAG 17454 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || | || ||| | || || || ||| || || ||||| || ||||| || | ||| Sbjct 17453 CAGCTGGAAGATGGACGTACTTTGTCAGACTACAACATTCAGAAGGAATCTACCCTTCAT 17394 Query 124743 TTGGTT 124748 | ||| Sbjct 17393 CTTGTT 17388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752833519484800