Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq99351 120 6e-22 seq35014 89.7 9e-13 >seq99351 Length=40490 Score = 120 bits (132), Expect = 6e-22 Identities = 109/134 (81%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||| Sbjct 3484 GCATTTTTTGGAGCTCAGCTTAATTCTTTTATCCATGTGATTATGTATTCGTATTATGGC 3543 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| |||||||| ||| | ||||||||||| || | |||| Sbjct 3544 TTAACTGCATTTGG-CCCATGGATTCAGAAA-TATTTGTGGTGGAAACGATACTTGACTA 3601 Query 52175 TAATGCAGTTGGTA 52188 || ||||| ||||| Sbjct 3602 TATTGCAGCTGGTA 3615 >seq35014 Length=100803 Score = 89.7 bits (98), Expect = 9e-13 Identities = 119/163 (73%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 189467 ATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAG 189526 ||||||||||||| |||||||| |||||| | || | |||||||| ||||| |||||| Sbjct 41433 ATGCAGATGGTGAAGGAAGGAAAGATGCATGGATTCCTCCGAATGTACTGGGCCAAGAAG 41374 Query 189527 ATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGAACAA 189585 || || || ||||| | | ||||| || || | ||||| | ||||||| | || | Sbjct 41373 ATTCTGGAGTGGACCCGCTCCCCTGAGGAAGCACTAGAGTT-TGCTATCTATCTCAATGA 41315 Query 189586 CAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 | || | || || ||| |||||| || || || |||||| Sbjct 41314 CCGGTTTCAGCTGGATGGCTGGGATCCCAATGGCTATGTAGGT 41272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919992026168440