Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq272715 116 4e-21 seq63886 116 4e-21 seq80395 105 8e-18 seq56013 105 8e-18 seq132136 98.7 1e-15 seq100566 95.1 1e-14 seq73099 95.1 1e-14 seq71382 95.1 1e-14 seq57594 95.1 1e-14 seq215307 91.5 2e-13 seq60680 91.5 2e-13 >seq272715 Length=527 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | ||| | ||||| |||| ||| ||| || || ||||| || || | | Sbjct 256 CCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 315 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || ||||| || || ||||| || | ||||||||||| | || Sbjct 316 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGGA 375 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| |||||| ||||| || | | ||||| || | || || Sbjct 376 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 435 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| |||||||| || ||||| |||||||| ||||| Sbjct 436 TCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq63886 Length=20840 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || || | |||||||||| ||| | || ||||| || |||||||||| | Sbjct 20250 CCTCCCCTCAAGCGTAGGACCAAATGCAGGGTGTTTTCTTTTTGGATGTTGTAATCAGAC 20191 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | ||| || ||||||||||| ||||| || || | | |||||| || | || Sbjct 20190 AAGGTACTCTCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGTTCTGAGGGG 20131 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| ||| |||| || ||| ||||| || | |||||| Sbjct 20130 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACACTCTCCATGGTGTCACTGGGTTCCACT 20071 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||||| ||| || | ||||| ||||| || | ||| Sbjct 20070 TCAAGGGTGATGGTTTAGCCAGTCAAGGTCTTCACAAAAATCTACAT 20024 >seq80395 Length=25489 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 857 TCTCCCCGTCGGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 916 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 917 ATACTAACGAGGA 929 >seq56013 Length=77579 Score = 105 bits (116), Expect = 8e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| ||||||| | ||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct 52015 TTTGCTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACC 51956 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 51955 ACTATACTAACGAGGA 51940 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | ||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct 46071 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTCACCACTA 46012 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 46011 TACTAACGAGGA 46000 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1463 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1404 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1403 TACTAACGAGGA 1392 >seq132136 Length=2287 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 ||| ||||||| || | ||||||||||||| || |||||||||||||||||| ||||| Sbjct 2270 AAAATTTCTCCCCGTCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTG 2211 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 2210 ACCACTATACTAACGAGGA 2192 >seq100566 Length=62511 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | || || || || || ||||| |||| | Sbjct 20504 CCACCTCTGAGACGAAGGACCAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCAGAC 20563 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || ||| | || ||||||||||| ||||| || || | || ||||||||| | || Sbjct 20564 AGGGTACGCCCATCTTCTAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGG 20623 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| ||| || | || | | ||||| || | || || Sbjct 20624 ATGCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCTACT 20683 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| |||||||| ||||| Sbjct 20684 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 20730 >seq73099 Length=12768 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || || |||| ||| | |||| || || || |||| || |||| | Sbjct 12009 CCACCTCTAAGACACAGGACCAGATGGAGTGTGGATTCTTTCTGGATATCGTCGTCAGGC 12068 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || ||||||||||| | || || ||||| | ||||||||| | || Sbjct 12069 AGGGTACGGCCATCTTCTAGCTGCTTGCATGCAAAAATGAGCCTCTGCTGGTCAGGAGGG 12128 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||||| |||||| |||| || | | ||||| || | || | Sbjct 12129 ATGCCCTCCTTGTCCCAGATTTTGGCCTTGAAATTCTCAATAGTGTCACTGGGCTCTGCC 12188 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | | |||||| | ||||| || || ||||| |||||||| | ||| Sbjct 12189 TTCAGAGTGATGATCTTGCCTGTCAGGGTCTTCACAAAGATCTACAT 12235 >seq71382 Length=70861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 35317 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 35376 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 35377 TACTAACGAGGA 35388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGC-GGAC 60112 || || ||| | |||| || | ||||||||||||| ||||||||||||||||||| || Sbjct 63104 ATAAATAATCTCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 63163 Query 60113 ATACTCACCACTATACTACCGAGGATTGA 60141 ||||||||||||| |||| |||||| ||| Sbjct 63164 ATACTCACCACTACACTAACGAGGAATGA 63192 >seq57594 Length=62027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 41332 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 41273 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 41272 TACTAACGAGGA 41261 >seq215307 Length=922 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 96 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 37 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 36 ATACTAACGAGGA 24 >seq60680 Length=32256 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| || | ||||||||||||| || ||| |||||||||||||| ||||| Sbjct 9080 AAAAGGTTCTCCCCGTCGGGGAATCGAACCCCGGCCTCTCGCGTGACAGGCGGGGATACT 9139 Query 60118 CACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 9140 GACCACTATACTAACGAGGA 9159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569832599531080