Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq116260 710 0.0 seq16086 102 6e-17 >seq116260 Length=17777 Score = 710 bits (786), Expect = 0.0 Identities = 852/1145 (74%), Gaps = 12/1145 (1%) Strand=Plus/Minus Query 107498 CCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGA 107557 |||||| |||||| | |||| |||||||| || ||| |||||| ||||| | | || Sbjct 6829 CCTGAAACTGCCACCCAAGAATTCCATCAATTGCTCTCTGATCACCAGAGGGAATCCTGA 6770 Query 107558 AGCAGTGGTCCAGGCCCTCCTAGAC-AACCTGGA-AGTGAAGA--AAAAGCGGTCGCCTC 107613 || |||| |||||| ||| ||| || |||| ||| ||| ||||| | ||||| Sbjct 6769 GGCTGTGGCCCAGGCAG-CCTTGACCAAGTTGGAGAGT-AAGTTGAAAAGAGA--GCCTC 6714 Query 107614 TCACTGGCACCTATTACCTCAACATAAC-CAGAGACTGTGAGCGCTTCAAGGCCCAAAGG 107672 | |||| || | || |||||||| || ||| ||||||| ||||| |||| | Sbjct 6713 TGACTGAGACTCAATATCTCAACATGACTCAG-GACTGTGCTTACTTCAGGGCCAGTCAG 6655 Query 107673 AAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATG 107732 |||||||| ||||||||||||| || || ||| |||||||||||||| || || ||| Sbjct 6654 AAGTTCATTGAGTTCCCACTGAGCAAGGAGGAGGAGGACTTCCCCATTGCATATTCAATG 6595 Query 107733 GTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAG 107792 ||| | ||||||||||||||||||||||| | || ||| | || ||||||||||| || Sbjct 6594 GTGATTCATGAGAAGATTGAAAACTTTGAGAGACTTCTGAGGGCTGTGTATGCCCCACAA 6535 Query 107793 AACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAG 107852 ||||| ||||| |||| |||||| |||||| ||||| | ||||| |||||||||| Sbjct 6534 AACATCTACTGCATCCATGTGGATAAGAAGTCTCCAGAAGCCTTCAAGGAGGCGGTCAGA 6475 Query 107853 GCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTAT 107912 ||||||| ||| |||||||| |||||||| |||||| || |||||| ||||| ||| Sbjct 6474 GCCATTAGTTCATGCTTCCCAAATGTCTTTGTGGCCAAAAATCTGGTCCAAGTGGTGTAT 6415 Query 107913 GCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCA 107972 || |||||||||||||| ||||||||||||||||| ||||| || ||||||||||| || Sbjct 6414 GCTTCCTGGTCCAGAGTACAAGCTGACCTGAACTGCATGGAGGAGTTGCTCCAGAGTTCT 6355 Query 107973 GTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCC 108032 ||||| ||||| || | ||||||| || || || ||||| ||||||||||||||||| Sbjct 6354 GTGCCCTGGAAATATCTTTTGAATACCTGTGGTACTGACTTTCCCATAAAGACCAATGCT 6295 Query 108033 GAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCT 108092 ||||| || | | ||||| | ||||| || ||||| |||||||| || || |||| Sbjct 6294 GAGATAGTGAGGTCTCTCAAAGTCTTGAATGGAAAGAATAGTATGGAATCAGAAATACCC 6235 Query 108093 TCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACAC-TGTACCC 108151 | | | |||||| ||||||||||| | |||||||| | ||| | | | || Sbjct 6234 ACCAATTATAAAAAAGGGCGCTGGAAATATCATTATGAGGTCA-AGAATGGCATATTCCA 6176 Query 108152 TACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTA 108211 || ||||| ||| | || || || || ||| ||||||||||||||||||||||| Sbjct 6175 GACTGATAAGATAAAGAAGCCCCCACCCCATGGTTTGCCCATGTTCACAGGGAATGCCTA 6116 Query 108212 TTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACT 108271 | | ||||| || ||| |||| ||||||| |||| ||||| || | |||| | Sbjct 6115 TATCGTGGCTTCCCGAAACTTTATCCAACACCTCTTTACGAACCCAAATGCTCAAAAGTT 6056 Query 108272 GGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG 108331 | | || ||||| || |||||||||||||| || ||||| ||||||||||| || || | Sbjct 6055 GATAGAGTGGGTGAAGGACACCTATAGCCCTGATGAACATCTCTGGGCCACTCTCCATAG 5996 Query 108332 TGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGAC 108391 || ||||||||||||||||| || ||| ||||| || || || ||| ||| Sbjct 5995 GATGCCCTGGATGCCTGGCTCTGTACCCTACCATGAAAAGTACCATATATCTGACCTGAA 5936 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 |||||| ||| || | || || ||||| | || || |||||| | | |||||| || Sbjct 5935 TGCCATTGCCCGGTTTGTGAAATGGCAAGGATATGATGGTGATGTCGGAAAGGGGGCCCC 5876 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 |||| | | |||| |||||| | | | | ||| ||| || | || |||||||| ||||| Sbjct 5875 TTATCCCCTCTGCACTGGAACCTACCAGCGGGGCATTTGTGTGTATGGGGCCGGAGACCT 5816 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGA 108571 | ||| || ||||| | || || || |||| || ||||||||||| | ||| ||||| Sbjct 5815 GCACTTTATGCTCCAAAGTCACCATCTGCTGGCCAATAAGTTTGACCCAAAGGTAGATGA 5756 Query 108572 TAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAACT 108631 || | || |||||| | ||||| || || || | || ||||| ||||||| ||||| Sbjct 5755 CAATGCACTCCAGTGCCTGGAAGAATATCTTCGGTACAAAGCCATTTATGGGAGGGAACT 5696 Query 108632 TTGAG 108636 |||| Sbjct 5695 CTGAG 5691 >seq16086 Length=44603 Score = 102 bits (112), Expect = 6e-17 Identities = 231/344 (67%), Gaps = 4/344 (1%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || || ||||| ||| ||| || |||||||| || || || ||||| || | || Sbjct 32381 CCCCTTAGCAAAGAGGAGGCAGAATTTCCCATTGCATATTCCATAGTGGTTTATCACAAA 32322 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| || || || | || | |||||||| ||||| | Sbjct 32321 ATTGAAATGCTTGATAGGCTCCTAAGAACCATCTACACACCTCAGAATTATTACTGCATT 32262 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || || || || || || || | || || ||| || |||| |||| || || Sbjct 32261 CATGTTGACAAAAAATCTCCTGAATCCTTTTTAGCGGCAGTGAAGGGCATTGCATCTTGT 32202 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| ||||||||||| |||||| | |||| ||| || ||||| || ||| || Sbjct 32201 TTCAATAATGTCTTCATTGCCAGTCAATTGGAAAGGGTCGTGTATGCATCATGGAGTAGG 32142 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985 || ||||| ||||| ||||| ||| ||| | || |||| | ||| | |||||| | Sbjct 32141 GTCCAAGCAGACCTCAACTGCATGAGAGA-TCTCTACAGA-CAGAGTTCAAAATGGAACT 32084 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAAT 108029 | || | ||| || || | || ||||| || || |||||| Sbjct 32083 ATTTGATAAATCTTTGTGGTATGGATTTCCCTATTAAAACCAAT 32040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347090048440014